Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0187
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645...    29   3.1  
12_01_0805 - 7378364-7378435,7378534-7378616,7378843-7379020,737...    29   5.4  
12_01_0548 + 4394182-4394313,4394395-4394517                           28   9.4  
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440...    28   9.4  
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37...    28   9.4  
02_04_0146 - 20188984-20189379,20189874-20190067,20190153-201905...    28   9.4  

>05_02_0083 +
           6450694-6450766,6451391-6451560,6451633-6451704,
           6451893-6452043,6452709-6452817,6452906-6453023,
           6453214-6453361,6453520-6453768,6454209-6454334,
           6454474-6454574,6454728-6454802,6455160-6455219
          Length = 483

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 492 KIKLNDAYKVDKRARGINXNSDSYEFTSANKLFAAD 599
           K+K NDA+K +K +  I   S + E  S+N ++ A+
Sbjct: 16  KLKANDAFKANKFSLAIELYSQAIELNSSNAVYWAN 51


>12_01_0805 -
           7378364-7378435,7378534-7378616,7378843-7379020,
           7379822-7379977,7380205-7380308,7381653-7381695,
           7382142-7382234,7382391-7382686,7382795-7382942,
           7383577-7383615
          Length = 403

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 404 HSLLLAYLSSG-GQTEEALREIFRNRXW 484
           H L L YL  G G  ++ LRE F N  W
Sbjct: 85  HILFLTYLPRGPGNQQKVLRETFNNHKW 112


>12_01_0548 + 4394182-4394313,4394395-4394517
          Length = 84

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = +3

Query: 48  FKANRIIIHNKIILYSITFQVFDDFT*FSTNLLARRTTVTCTPLEDI 188
           FKA R ++HN      I  +V ++F  +S + +A+ T    + + D+
Sbjct: 10  FKAERYVLHNPKSFNDIFIRVLEEFVCWSYSFIAQVTRKGSSVISDL 56


>09_04_0684 -
           19442335-19442990,19443774-19443839,19443935-19444032,
           19444787-19445157
          Length = 396

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +2

Query: 665 GNPGAAPGYIHXLGVPGYQ 721
           GNPG APGY    G P YQ
Sbjct: 355 GNPGYAPGYHGQGGNPSYQ 373


>06_01_0037 -
           369498-369568,369668-369760,369889-369991,370061-370156,
           370227-370293,370379-370446,370606-370681,370890-370975,
           371065-371150,371337-371409,371490-371735,371845-371937,
           372045-372119,372496-372540,372631-372708,372805-372921,
           373865-373894
          Length = 500

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 387 HLSRYTTHYYLRISHPADKLKKL*GK--SLEIEXGXDKIKLND 509
           H  +   HYYL +    DKL KL  +   L+   G  KI +ND
Sbjct: 289 HSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISIND 331


>02_04_0146 -
           20188984-20189379,20189874-20190067,20190153-20190547,
           20191467-20191549
          Length = 355

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 112 STILPNSQPICSQGEQQLPAH 174
           +TILP+++P C++   Q+P H
Sbjct: 110 ATILPSARPWCAEARYQIPDH 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,946,822
Number of Sequences: 37544
Number of extensions: 367291
Number of successful extensions: 767
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)