Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0184
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.7  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 134 RGLLNLGYGYGIDGLDVGYIXHGQGLGGA 220
           +  LNL   +G DG D+ +   GQ  G A
Sbjct: 127 KSALNLVQKWGFDGFDLDWEYPGQRGGAA 155


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 140 LLNLGYGYGIDGLDVGYIXHG 202
           LL LGY   +   D  Y+ HG
Sbjct: 472 LLELGYRIIVSTKDAWYLDHG 492


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 559 GIRAPXTGLRPCQLVTCRD 503
           G+ A   G+  C+L++C+D
Sbjct: 5   GLGAIQPGVNRCKLLSCKD 23


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 164 RIHTRGSGDHVCPI 123
           R HT  SGD  C +
Sbjct: 453 RYHTSASGDEACSL 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,849
Number of Sequences: 336
Number of extensions: 1654
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)