Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0184
         (649 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g61255.1 68414.m06903 expressed protein                             34   0.094
At4g32920.1 68417.m04685 glycine-rich protein                          29   2.7  
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina...    29   2.7  
At4g29240.1 68417.m04182 leucine-rich repeat family protein / ex...    28   6.1  
At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing ...    28   6.1  
At2g05510.1 68415.m00583 glycine-rich protein                          27   8.1  

>At1g61255.1 68414.m06903 expressed protein
          Length = 143

 Score = 33.9 bits (74), Expect = 0.094
 Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = +2

Query: 146 NLGYGYG-IDGLDV----GYIXHGQGLGGAYNYVDGGYSSG 253
           N GYG G   GL      G+I  G G GG+Y+ + GGYS G
Sbjct: 48  NKGYGSGGYPGLTTEPATGFILPGSGPGGSYSELSGGYSKG 88


>At4g32920.1 68417.m04685 glycine-rich protein 
          Length = 1432

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +1

Query: 1    GHPPLKRHNENSALLSFPAGSSSGCQ 78
            G+P LKRH     L  F A SSS CQ
Sbjct: 1156 GNPALKRHGVRVDLARFQALSSSSCQ 1181


>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 769

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 122 KLDKRGLLNLGYGYGIDGLDVGYIXHGQGLGGAYNYVDGGYSSGSAS 262
           K+  RG+++   G   +G  +  + HG G+   Y Y DGG+  G+ S
Sbjct: 139 KMSGRGVMSWANGDLFNGFWLNGLRHGSGV---YKYADGGFYFGTWS 182


>At4g29240.1 68417.m04182 leucine-rich repeat family protein /
           extensin family protein contains Pfam PF00560: Leucine
           Rich Repeat domains; similar to leucine-rich
           repeat/extensin 1 (GI:13809918) [Arabidopsis thaliana]
          Length = 415

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 137 GLLNLGYGYGIDG-LDVGYIXHGQGLGGAYNYVDGGYSSGSASTSV 271
           GL+     +G+ G + VG I  G G GG   +V GGY++G    +V
Sbjct: 22  GLVQTDASFGVGGGVGVG-IGGGGGGGGGGVWVGGGYNNGGNRNAV 66


>At1g47655.1 68414.m05294 Dof-type zinc finger domain-containing
           protein
          Length = 209

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 152 GYGYGIDGLDVGYIXHGQGLGGAYNYVDG 238
           GYGYG++ + +GY+  G    G    VDG
Sbjct: 148 GYGYGLEEMSIGYL--GDSSVGEIPVVDG 174


>At2g05510.1 68415.m00583 glycine-rich protein 
          Length = 127

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 146 NLGYGYGIDGLDVGYIXHGQGLGGAYNYVDGGYSSG 253
           N G G+G+DG   G+  H  G GG Y    GG+  G
Sbjct: 67  NGGGGHGLDGYGGGHGGHYGGGGGHYG-GGGGHGGG 101


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,952,440
Number of Sequences: 28952
Number of extensions: 157375
Number of successful extensions: 437
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)