Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0180
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    26   0.29 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.66 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.2  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.2  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 510 GSYCGD-PPTPRGVPLPAAPIPRPSVLAP 427
           G  C + PP P+  PLP  PI  P+++ P
Sbjct: 168 GFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 188 ICKRIVYGWVTKRIVF 141
           ICK   +G++TK+++F
Sbjct: 525 ICKNFCFGFITKQLIF 540


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 489 PTPRGVPLPAAPIPRPSVLAP 427
           P P+  PLP  PI  P+++ P
Sbjct: 176 PLPQVPPLPLPPIFAPTMINP 196


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 335 PPASSQYTRPAQQASAPPPNFTTADFQEA 421
           PPA S Y    + +    PN   ADF +A
Sbjct: 118 PPARSPYEWIKKTSYQSQPNPEPADFADA 146


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 335 PPASSQYTRPAQQASAPPPNFTTADFQEA 421
           PPA S Y    + +    PN   ADF +A
Sbjct: 118 PPARSPYEWIKKTSYQSQPNPEPADFADA 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,556
Number of Sequences: 336
Number of extensions: 3218
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)