BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0180 (765 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 1.1 At5g51340.1 68418.m06366 expressed protein 29 3.4 At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 3.4 At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 3.4 At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 29 3.4 At5g63140.1 68418.m07928 calcineurin-like phosphoesterase family... 29 4.5 At4g01160.1 68417.m00154 BTB/POZ domain-containing protein conta... 29 4.5 At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.5 At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 5.9 At1g32640.1 68414.m04026 basic helix-loop-helix (bHLH) protein (... 28 7.8 >At4g13340.1 68417.m02084 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 760 Score = 30.7 bits (66), Expect = 1.1 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = -1 Query: 555 PGRSTAVWDRSPGRXGSY-CGDPPTPRG---VPLPAAPIPRPSVLAPLVAS 415 PG+ A R P GS+ CG +PR PLP +P P AP+ ++ Sbjct: 369 PGQCKAFLSRPPVNCGSFSCGRSVSPRPPVVTPLPPPSLPSPPPPAPIFST 419 >At5g51340.1 68418.m06366 expressed protein Length = 726 Score = 29.1 bits (62), Expect = 3.4 Identities = 10/33 (30%), Positives = 24/33 (72%) Frame = -3 Query: 193 DGSAKGLSMVGSLNGLSSNLDIFNKFSALLFSF 95 + S+K L ++G LNG++++L + +++LF++ Sbjct: 505 ESSSKALDLIGPLNGMTNSLSGVREEASILFAY 537 >At4g27850.1 68417.m03999 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 577 Score = 29.1 bits (62), Expect = 3.4 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -1 Query: 555 PGRSTAVWDRSPGRXGSYCGDPPTPRGVPLPAAPIPRPSVLAPL 424 PG + + P G PP+P P P +P+P P +PL Sbjct: 184 PGPDSPLPSPGPDSPLPLPGPPPSPSPTPGPDSPLPSPGPDSPL 227 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 498 GDPPTPRGVPLPAAPIPRPSVLAPL 424 G PP+P P P +P+P P +PL Sbjct: 250 GPPPSPSPTPGPDSPLPSPGPDSPL 274 >At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to pEARLI 1 (Accession No. L43080): an Arabidopsis member of a conserved gene family (PGF95-099), Plant Physiol. 109 (4), 1497 (1995); contains Pfam protease inhibitor/seed storage/LTP family domain PF00234 Length = 182 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -1 Query: 510 GSYCGDPPTPRGVPLPAAPIPRPSVLAPLVAS 415 G+ C P+P+ PLP +P P V P V S Sbjct: 25 GTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPS 56 >At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 772 Score = 29.1 bits (62), Expect = 3.4 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +2 Query: 365 AQQASAPPPNFTTAD-FQEATRGARTEGRGIGAAGSGT 475 A + S PPN D F+ R R+ GRG GAAGS + Sbjct: 94 AGKESFSPPNADKRDHFRYDGRRNRSRGRGTGAAGSSS 131 >At5g63140.1 68418.m07928 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase Length = 389 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 383 PPPNFTTADFQEATRGARTEGRGIGAAGSG 472 P P F + D + AT+G R EG + SG Sbjct: 256 PLPEFLSFDSKNATKGVRQEGTSAASTNSG 285 >At4g01160.1 68417.m00154 BTB/POZ domain-containing protein contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) [Arabidopsis thaliana]; similar to actinfilin (GI:21667852) [Rattus norvegicus] Length = 505 Score = 28.7 bits (61), Expect = 4.5 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +3 Query: 243 DYNPSTANKMLIKPRLSNSNQHNRQSCRLCHHQPAASTQ 359 D+ PS A+K++++ + Q L H QPA++++ Sbjct: 310 DFRPSVASKLVVEALFFKTESLAHQHVLLAHEQPASTSR 348 >At3g24550.1 68416.m03083 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain Length = 652 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 332 SPPASSQYTRPAQQASAPPPNFT 400 SPP +S T P AS+PPP T Sbjct: 17 SPPTNSTTTTPPPAASSPPPTTT 39 >At1g23540.1 68414.m02960 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 720 Score = 28.3 bits (60), Expect = 5.9 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 332 SPPASSQYTRPAQQASAPPPN 394 SPPA S T P + S PPP+ Sbjct: 41 SPPADSSSTPPLSEPSTPPPD 61 >At1g32640.1 68414.m04026 basic helix-loop-helix (bHLH) protein (RAP-1) identical to bHLH protein GB:CAA67885 GI:1465368 from [Arabidopsis thaliana] Length = 623 Score = 27.9 bits (59), Expect = 7.8 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +3 Query: 102 NNSAENLLKMSKFEDNPFSDPTIDNPFADPSVQQVARSTNNA---TRGLEDYNPSTANKM 272 ++S++ K +FE+ S T +NP DP+ V T N + N ST++ Sbjct: 299 SSSSQLFSKSIQFENGSSSTIT-ENPNLDPTPSPVHSQTQNPKFNNTFSRELNFSTSSST 357 Query: 273 LIKPR 287 L+KPR Sbjct: 358 LVKPR 362 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,370,617 Number of Sequences: 28952 Number of extensions: 277265 Number of successful extensions: 1202 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1192 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1712086600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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