Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0179
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    25   0.99 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.99 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    24   1.3  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    24   1.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.0  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    22   5.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   7.0  

>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 291 CETFYLLDCNNKLNLPCRQTCFS-NYFL 211
           CE  Y+L    +L+  CR  CFS  YF+
Sbjct: 69  CEDCYMLFREPQLHNLCRSECFSTKYFV 96


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 24.6 bits (51), Expect = 0.99
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 161 IDMFIFTVYFFLLNKSNHNNIPISI*RMF*VCTYYTF 51
           +D+ +  +YF + NK +    PISI  ++ V   Y+F
Sbjct: 1   MDLEVLEIYFTVANKFSGKLWPISIVLIYTVGVVYSF 37


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 291 CETFYLLDCNNKLNLPCRQTCF-SNYF 214
           CE  Y+L    +L+  CR+ CF ++YF
Sbjct: 69  CEDCYMLFREPQLHNLCRKNCFTTDYF 95


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -1

Query: 291 CETFYLLDCNNKLNLPCRQTCF-SNYF 214
           CE  Y+L    +L+  CR+ CF ++YF
Sbjct: 69  CEDCYMLFREPQLHNLCRKNCFTTDYF 95


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -2

Query: 368 VYLTLLKVETRQVHTITEITNKLWLTAKLFTCWTVII 258
           +Y+ + K+  R  H   +  ++  L ++  T WT+I+
Sbjct: 661 IYIQVTKIIIRTDHQALKFLSRCRLLSERLTRWTLIL 697


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 693 IGLQHFPWYLSQPITGANXVRNXAXKG 773
           + L H+ W+L  P  GA  + +   +G
Sbjct: 203 LNLHHWHWHLVYPFEGAREIVDKNRRG 229


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = +2

Query: 623 YESTKITSNPWGHTLSDATTIPVHWATAL 709
           +E       P GH    A  +P HW   L
Sbjct: 1   FEGMPYAKPPLGHLRFKAPELPEHWEGVL 29


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 331 TCRVSTFSKVR*TQCCCARPRKH 399
           +CR STF   R     C RPR +
Sbjct: 388 SCRSSTFRNNRDEYNVCFRPRNN 410


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,598
Number of Sequences: 336
Number of extensions: 4710
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)