Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0179
(843 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001485-1|AAN71240.1| 339|Drosophila melanogaster LD22928p pro... 58 2e-08
AF171098-1|AAD55391.1| 226|Drosophila melanogaster methyl-CpG b... 58 2e-08
AE014297-969|AAF54401.1| 226|Drosophila melanogaster CG8208-PB,... 58 2e-08
AE014297-968|AAF54400.2| 339|Drosophila melanogaster CG8208-PA,... 58 2e-08
AE014134-3384|AAN11115.1| 381|Drosophila melanogaster CG31622-P... 33 0.65
>BT001485-1|AAN71240.1| 339|Drosophila melanogaster LD22928p
protein.
Length = 339
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 509 SKVKTDLKHGTQEKPKQLFWEKRLEGLTACDANGCNWNYESTKITSNPWGHTLSDATTIP 688
+K K + KHGT+EKPKQLFWEKRLE L AC +G + S T G +++ T +
Sbjct: 212 AKAKNEPKHGTREKPKQLFWEKRLERLRACHDSGEELDDISLPKTIRTVGPNVNEQTVLQ 271
Query: 689 VHWATALSMVS 721
ATAL M++
Sbjct: 272 -SVATALHMLN 281
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 417 RGVRNDASLVPPIRQTASIFKQPVTV---YKTQEVKLKQISNMGHRKSLNNYFGKK 575
R +R D SLVPPIRQTASIFKQPVTV +K K K G R+ F +K
Sbjct: 178 RALRTDVSLVPPIRQTASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWEK 233
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 142 VNMNISIERKRSDCSALPKGWQREEVVRKTGLSA 243
+N +++IERKR DCS LPKGWQR+E VRK+G SA
Sbjct: 3 MNPSVTIERKRVDCSVLPKGWQRDE-VRKSGSSA 35
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 255 VYYYSPTGKKFRSKPELVRYLGDSVDLSCFDFQQGQI 365
V+YYSPTGK+ KP+ D++ DFQ G++
Sbjct: 60 VFYYSPTGKRAEGKPQ---------DIAIPDFQPGKM 87
>AF171098-1|AAD55391.1| 226|Drosophila melanogaster methyl-CpG
binding domain-likeprotein protein.
Length = 226
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 509 SKVKTDLKHGTQEKPKQLFWEKRLEGLTACDANGCNWNYESTKITSNPWGHTLSDATTIP 688
+K K + KHGT+EKPKQLFWEKRLE L AC +G + S T G +++ T +
Sbjct: 99 AKAKNEPKHGTREKPKQLFWEKRLERLRACHDSGEELDDISLPKTIRTVGPNVNEQTVLQ 158
Query: 689 VHWATALSMVS 721
ATAL M++
Sbjct: 159 -SVATALHMLN 168
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 417 RGVRNDASLVPPIRQTASIFKQPVTV---YKTQEVKLKQISNMGHRKSLNNYFGKK 575
R +R D SLVPPIRQTASIFKQPVTV +K K K G R+ F +K
Sbjct: 65 RALRTDVSLVPPIRQTASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWEK 120
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 142 VNMNISIERKRSDCSALPKGWQREEVVRKTGLSA 243
+N +++IERKR DCS LPKGWQR+E VRK+G SA
Sbjct: 3 MNPSVTIERKRVDCSVLPKGWQRDE-VRKSGSSA 35
>AE014297-969|AAF54401.1| 226|Drosophila melanogaster CG8208-PB,
isoform B protein.
Length = 226
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 509 SKVKTDLKHGTQEKPKQLFWEKRLEGLTACDANGCNWNYESTKITSNPWGHTLSDATTIP 688
+K K + KHGT+EKPKQLFWEKRLE L AC +G + S T G +++ T +
Sbjct: 99 AKAKNEPKHGTREKPKQLFWEKRLERLRACHDSGEELDDISLPKTIRTVGPNVNEQTVLQ 158
Query: 689 VHWATALSMVS 721
ATAL M++
Sbjct: 159 -SVATALHMLN 168
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 417 RGVRNDASLVPPIRQTASIFKQPVTV---YKTQEVKLKQISNMGHRKSLNNYFGKK 575
R +R D SLVPPIRQTASIFKQPVTV +K K K G R+ F +K
Sbjct: 65 RALRTDVSLVPPIRQTASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWEK 120
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 142 VNMNISIERKRSDCSALPKGWQREEVVRKTGLSA 243
+N +++IERKR DCS LPKGWQR+E VRK+G SA
Sbjct: 3 MNPSVTIERKRVDCSVLPKGWQRDE-VRKSGSSA 35
>AE014297-968|AAF54400.2| 339|Drosophila melanogaster CG8208-PA,
isoform A protein.
Length = 339
Score = 57.6 bits (133), Expect = 2e-08
Identities = 32/71 (45%), Positives = 43/71 (60%)
Frame = +2
Query: 509 SKVKTDLKHGTQEKPKQLFWEKRLEGLTACDANGCNWNYESTKITSNPWGHTLSDATTIP 688
+K K + KHGT+EKPKQLFWEKRLE L AC +G + S T G +++ T +
Sbjct: 212 AKAKNEPKHGTREKPKQLFWEKRLERLRACHDSGEELDDISLPKTIRTVGPNVNEQTVLQ 271
Query: 689 VHWATALSMVS 721
ATAL M++
Sbjct: 272 -SVATALHMLN 281
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 417 RGVRNDASLVPPIRQTASIFKQPVTV---YKTQEVKLKQISNMGHRKSLNNYFGKK 575
R +R D SLVPPIRQTASIFKQPVTV +K K K G R+ F +K
Sbjct: 178 RALRTDVSLVPPIRQTASIFKQPVTVIRNHKQDPAKAKNEPKHGTREKPKQLFWEK 233
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 142 VNMNISIERKRSDCSALPKGWQREEVVRKTGLSA 243
+N +++IERKR DCS LPKGWQR+E VRK+G SA
Sbjct: 3 MNPSVTIERKRVDCSVLPKGWQRDE-VRKSGSSA 35
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 255 VYYYSPTGKKFRSKPELVRYLGDSVDLSCFDFQQGQI 365
V+YYSPTGK+ KP+ D++ DFQ G++
Sbjct: 60 VFYYSPTGKRAEGKPQ---------DIAIPDFQPGKM 87
>AE014134-3384|AAN11115.1| 381|Drosophila melanogaster CG31622-PC,
isoform C protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.65
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = -2
Query: 431 ITYTPVVKLRSCFLGLAQQHCVYLTLLKVETRQVHTITEITNKLWLTAKLFTCWTVIINS 252
+ Y + L F L +YLT++ ++T++ + ITN +WL+ TC +++
Sbjct: 239 LVYGFIAWLSWMFASLDVTGVIYLTMV-IQTKKSIVLKLITNVVWLSPTFMTCAASFMSN 297
Query: 251 --TFPADRPVFLTTSSLCQPLGNAEQSDRFLSIDMF---IFTVY-FFLLNKS 114
T A++ + T G ++FL ++ I T Y FF L+KS
Sbjct: 298 RVTIQANKTAKMLTKVPRTGTGLDRMIEKFLLKNLRQKPILTAYGFFALDKS 349
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,128,730
Number of Sequences: 53049
Number of extensions: 807093
Number of successful extensions: 1934
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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