Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0179
         (843 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-4|CAA20957.1|  230|Caenorhabditis elegans Hypothetical ...    33   0.34 
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    31   0.78 
Z79695-7|CAO79774.1|  291|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z79695-6|CAB01968.3|  293|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p...    29   5.5  
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr...    29   5.5  

>AL031627-4|CAA20957.1|  230|Caenorhabditis elegans Hypothetical
           protein Y102A5C.13 protein.
          Length = 230

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 23/80 (28%), Positives = 36/80 (45%)
 Frame = -2

Query: 314 ITNKLWLTAKLFTCWTVIINSTFPADRPVFLTTSSLCQPLGNAEQSDRFLSIDMFIFTVY 135
           + ++ W  AK    ++ II+S FP +    LT    C PLG    SD     D+ + + +
Sbjct: 117 VESEQWKRAKSIYVYS-IISSNFPIENLFHLTV--FCVPLGELAVSDAIKIRDILLKSAH 173

Query: 134 FFLLNKSNHNNIPISI*RMF 75
           F         NIP  + R+F
Sbjct: 174 FEYGQIDVKENIPQEVVRVF 193


>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
           protein.
          Length = 1376

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 234 SVGREG*VYYYSPTGKKFRSKPELVRYL 317
           S G +G V Y++P GKK  +  E+VRYL
Sbjct: 348 SAGVKGDVSYFAPCGKKLSTYSEVVRYL 375


>Z79695-7|CAO79774.1|  291|Caenorhabditis elegans Hypothetical
           protein F27D4.2b protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 591 QLVMQMGVIGTTSLPKLPPILGXIHFLMPPLFQSIGLQHF 710
           Q+  QM ++    +P +PP +  +  +MPP   +  +QHF
Sbjct: 168 QMFQQMPMMMPGMVPGMPPGMAGLPGMMPPNNMAAAMQHF 207


>Z79695-6|CAB01968.3|  293|Caenorhabditis elegans Hypothetical
           protein F27D4.2a protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 591 QLVMQMGVIGTTSLPKLPPILGXIHFLMPPLFQSIGLQHF 710
           Q+  QM ++    +P +PP +  +  +MPP   +  +QHF
Sbjct: 168 QMFQQMPMMMPGMVPGMPPGMAGLPGMMPPNNMAAAMQHF 207


>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
            protein F10F2.1 protein.
          Length = 2507

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 387  PCTATLCLSDLAESRNTTGPHYHRDNEQALAYCETFY 277
            P T ++  +DL    N + P+Y +   Q L YCE  +
Sbjct: 1711 PGTLSVTANDLFFDANESDPNYKKQCAQVLRYCEALH 1747


>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
            F10F2.1 protein.
          Length = 2507

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 387  PCTATLCLSDLAESRNTTGPHYHRDNEQALAYCETFY 277
            P T ++  +DL    N + P+Y +   Q L YCE  +
Sbjct: 1711 PGTLSVTANDLFFDANESDPNYKKQCAQVLRYCEALH 1747


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,763,139
Number of Sequences: 27780
Number of extensions: 426928
Number of successful extensions: 1100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)