Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0178
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 158 4e-39
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 157 9e-39
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 149 2e-36
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 144 7e-35
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 78 9e-15
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 48 8e-06
11_06_0533 + 24734177-24735787 31 0.77
02_01_0142 - 1022387-1022518,1022627-1022671,1022750-1022850,102... 30 1.8
10_06_0170 + 11431540-11432259,11434552-11434644,11434739-114348... 30 2.4
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 29 4.1
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 7.2
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 7.2
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 7.2
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 9.5
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 28 9.5
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 158 bits (384), Expect = 4e-39
Identities = 77/147 (52%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 FYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFG 434
FYA+S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFG
Sbjct: 84 FYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFG 143
Query: 435 PDICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLN 611
PDICG TKKVH IF+ KNHLIKK + +H+ TL + T + K +
Sbjct: 144 PDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQS 203
Query: 612 LGDLEADWDFLPPKKIKDPEAKKPEDW 692
G + WD LPPK+IKDPEAKKPEDW
Sbjct: 204 -GSIYEHWDILPPKQIKDPEAKKPEDW 229
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSED 249
+VFF+EKF +D WES WV SE E G++ T+GK+ DPE DKG++TSED
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSED 81
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 648 PKKIKDPEAKKPEDW 692
PK+I DP+AKKPEDW
Sbjct: 250 PKEIPDPDAKKPEDW 264
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 157 bits (381), Expect = 9e-39
Identities = 75/147 (51%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
Frame = +3
Query: 255 FYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFG 434
FYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETPY IMFG
Sbjct: 91 FYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETPYSIMFG 150
Query: 435 PDICGPGTKKVHVIFSYKGKNHLIKKISAAKM-MSTHICTL*L*NLTTPMKSSLTMRKLN 611
PDICG TKKVH I + GKNHLIKK K TH+ TL + + +
Sbjct: 151 PDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTL-IIRPDAKYSILIDNTEKQ 209
Query: 612 LGDLEADWDFLPPKKIKDPEAKKPEDW 692
G + DW+ +PPK +DPEAKKPEDW
Sbjct: 210 TGSIYDDWNIIPPKNKRDPEAKKPEDW 236
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGL 234
+VFF+EKF DD WE WV SE G++ T+GK++ D DDKG+
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGD-ADDKGM 72
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 648 PKKIKDPEAKKPEDW 692
PK+I DPEA KPEDW
Sbjct: 257 PKEITDPEATKPEDW 271
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 149 bits (361), Expect = 2e-36
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Frame = +3
Query: 258 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 437
+A+S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGP
Sbjct: 83 FAISAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGP 142
Query: 438 DICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 614
DICG TKK+H+I SY+G+N+ IKK + TH+ T L + R+
Sbjct: 143 DICGTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFIL-RPDASYSILVDNRERES 201
Query: 615 GDLEADWDFLPPKKIKDPEAKKPEDW 692
G + DWD LPP+KIKD AKKP+DW
Sbjct: 202 GSMYTDWDILPPRKIKDVHAKKPKDW 227
Score = 53.6 bits (123), Expect = 2e-07
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDA 252
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DA
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDA 80
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 144 bits (349), Expect = 7e-35
Identities = 68/146 (46%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 258 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 437
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 438 DICGPGTKKVHVIFSYKGKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNL 614
DICG TKK+H+I SY+G+N+ IKK + TH T L + R+
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFIL-RPDASYSLLVDNREREF 201
Query: 615 GDLEADWDFLPPKKIKDPEAKKPEDW 692
G + DWD LPP+KIK+ AKKP+DW
Sbjct: 202 GSMYTDWDILPPRKIKESNAKKPKDW 227
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1
Query: 85 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDA 252
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDA 80
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 648 PKKIKDPEAKKPEDW 692
PK+I DP+ KKPE W
Sbjct: 248 PKEIPDPKDKKPESW 262
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 77.8 bits (183), Expect = 9e-15
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Frame = +3
Query: 258 YALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEI 425
YA+ ++ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY I
Sbjct: 73 YAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTI 132
Query: 426 MFGPDICGPGTKKVHVIFSYK----GK--NHLIK---KISAAKMMSTHICTL*L*NLTTP 578
MFGPD CG T KVH I +K GK H +K + K+ + L N
Sbjct: 133 MFGPDKCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRI 191
Query: 579 MKSSLTMRKLN-LGDLEADWDFLPPKKIKDPEAKKPEDWG*QAHL 710
+ +K N L + + +P K I DP+ KKPEDW +A +
Sbjct: 192 LVDGEEKKKANFLSADDFEPSLIPSKTIPDPDDKKPEDWDERAKI 236
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 648 PKKIKDPEAKKPEDW 692
P++I DPEA KPEDW
Sbjct: 271 PEEIDDPEANKPEDW 285
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 630 DWDFLPPKKIKDPEAKKPEDW 692
DWD P +I+D EA KPE W
Sbjct: 246 DWDEDAPMEIEDEEATKPEGW 266
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 630 DWDFLPPKKIKDPEAKKPEDW 692
DWD KI DP+A KP+DW
Sbjct: 229 DWD--ERAKIPDPDAVKPDDW 247
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2
Query: 506 QKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 616
+KD+ C+ D TH+YTLI++PD Y +LIDN + +G
Sbjct: 521 KKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTG 557
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 489 GKNHLIKK-ISAAKMMSTHICTL*L*NLTTPMKSSLTMRKLNLGDLEADWDFLPPKKIKD 665
G NHLIKK + TH+ TL + + + G + D D LPPKK KD
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLII-RPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKD 573
Query: 666 PEAKKPEDWG 695
PEAKK + G
Sbjct: 574 PEAKKVDVMG 583
>11_06_0533 + 24734177-24735787
Length = 536
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 721 GVWNKWACHPQSSGFLASGSLIFLGGRK 638
GVW W CHP ++ LA+ S+++ R+
Sbjct: 510 GVWT-WMCHPATTTVLAAASVVYAASRR 536
>02_01_0142 -
1022387-1022518,1022627-1022671,1022750-1022850,
1023102-1023205,1023352-1023453,1024190-1024404
Length = 232
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +3
Query: 570 TTPMKSSLTMRKLNLGDLEADWDFLPPKKIKDPEAKKPEDWG*QAHLFQTPKTRSLRIGT 749
T+ ++ +T+ L LEA +PPK I D E K +D + K+R+ ++ T
Sbjct: 43 TSAIRRKITILGTRLDSLEALLSRIPPKSITDKELHKRQD------MLSNLKSRAKQMAT 96
Query: 750 SLN 758
S N
Sbjct: 97 SFN 99
>10_06_0170 +
11431540-11432259,11434552-11434644,11434739-11434806,
11434873-11435011,11435179-11435229,11435600-11435675,
11436216-11436274
Length = 401
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = -1
Query: 751 LVPILRLLVFGVWNKWACHPQSSGFLASG------SLIFLGGRKSQSASRSPRF 608
L P+L L FG W P +A+G L+F GG S +A RSP +
Sbjct: 73 LQPVLLLHGFGARATWQWAPFLRPLIAAGLAPFVPDLVFFGGSASPAADRSPAY 126
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = -3
Query: 524 CSGYLFDEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWSLSVHVLLLQFAVKDLEVSAS 351
CSG+L L L+ ++ V ++G +++ + + + + +HV LL FA D +SAS
Sbjct: 80 CSGFLGTIEALQLMEKNVVAVIGPQSSGIGHVISHVVN-ELHVPLLSFAATDPTLSAS 136
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -1
Query: 598 IVNEDFIGVVRFHNQSVQMCVDI 530
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 442 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 299
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 130 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 23
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 128 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 42
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = -3
Query: 461 LGSRTTNVRAEHNLIWSLSVHVL---LLQFAVKDLEV--SASTVNVLFMFDSEL-DY-QG 303
LGS T N+ A+H+ S H+ L +FAV E+ S N L +++++ D+ G
Sbjct: 701 LGSSTANLSADHDTSNLSSPHIAASSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNG 760
Query: 302 FTLITERFELTGES 261
+I ++F +GE+
Sbjct: 761 AQVIFDQFLSSGEA 774
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,059,834
Number of Sequences: 37544
Number of extensions: 491347
Number of successful extensions: 1432
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -