Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0177
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.3  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.3  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = -3

Query: 441 ILYSVRIIGMKXHWYFXVPASKSWIP 364
           ++Y +  IG+  +++F   A   W+P
Sbjct: 220 LIYFIEDIGLNTYYFFLRQAFPFWLP 245


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/41 (26%), Positives = 16/41 (39%)
 Frame = +1

Query: 304 PWTEHRPDNYFPASVESMAIRYPTFTRRNREIPVXLHADNT 426
           P TE  PD Y  + + S A            +P+ +  D T
Sbjct: 146 PLTEVFPDKYMDSGIFSRAREEANVVPEGARVPIEIPRDYT 186


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 435 YSVRIIGMKXHWYFXVPASKSWIP 364
           Y +  IG+  +++F   A   W+P
Sbjct: 222 YFIEDIGLNTYYFFLRQAFPFWLP 245


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +1

Query: 583 WAWGFPTSVWDXAVANXXIGSG-FMTAP 663
           WA+GF  S     + N  IG G F+  P
Sbjct: 80  WAFGFAMSFGTDKLNNPFIGMGEFLIDP 107


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 191 LLMKXQNSTDVTNF 232
           ++ + QN+TD TNF
Sbjct: 643 IMPRVQNATDTTNF 656


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 447 IGILYSVRIIGMKXHWY 397
           IG++Y+   IGM+  W+
Sbjct: 380 IGVVYNGDEIGMEDRWF 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,794
Number of Sequences: 438
Number of extensions: 4393
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)