Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0177
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17920.1 68415.m02075 expressed protein similar to zinc finge... 30 1.4
At4g26450.1 68417.m03805 expressed protein 28 5.7
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing... 28 7.6
At2g25060.1 68415.m02997 plastocyanin-like domain-containing pro... 28 7.6
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 27 10.0
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 27 10.0
At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine deacet... 27 10.0
At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine deacet... 27 10.0
At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine deacet... 27 10.0
At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine deacet... 27 10.0
At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine deacet... 27 10.0
>At2g17920.1 68415.m02075 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 307
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 427 DRIQNANLDANGPFYFI-SHGFLEGXHKNGLKIXANALXDIDGNESATVIIVDWAWGFPT 603
D IQN L GP FI + ++ +N L I A L N A + + AWG
Sbjct: 7 DEIQNLELRQEGPSLFIPNEAYIMVAGRNRLSIIARPLNPRVQNLQAIITALPRAWGLTA 66
Query: 604 SV 609
V
Sbjct: 67 HV 68
>At4g26450.1 68417.m03805 expressed protein
Length = 1248
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = +1
Query: 340 ASVESMAIRYPTFTRRNREIPVXLHADNTDRIQNANLDANGPFYFISHGFLEGXHKNGLK 519
AS++ +FT+ ++ + ++L A GP ++SH + H +GL+
Sbjct: 305 ASIDQQCGADESFTKSGIDLATLCKFEKVPTRTRSSLTAKGPKLYLSHNIKDTSHNSGLE 364
>At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing
protein contains similarity to (R)-specific enoyl-CoA
hydratase PhaJ1 [Pseudomonas oleovorans]
gi|22506675|gb|AAM97601; contains Pfam domain PF01575:
MaoC like domain
Length = 337
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 149 YNRTSATVMLQTIMLLMKXQNSTDVTNFPAGFSDDRNWSXVMTST-----DVFLKPTRGR 313
Y++ TVM++ + L K + T FP G R++S V + T DV L+ TR
Sbjct: 151 YSKKHMTVMMRKLSLNYKGEAMLAKTVFPRGLLVLRSFSSVASKTLLKVGDV-LRETRVF 209
Query: 314 STDPIIISLHLSSQW 358
S++ I +S W
Sbjct: 210 SSEDIKAYAEVSHDW 224
>At2g25060.1 68415.m02997 plastocyanin-like domain-containing
protein
Length = 182
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 415 ADNTDRIQNANLDANGPFYFIS--HGFLEGXHKNGLKI 522
A+ TD LD +GPFYFIS +G E K L +
Sbjct: 94 ANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 FPASVES-MAIRYPTFTRRNREIPVXLHADNTDRIQNANLDANGPFYFISHGFLEGXHKN 510
+ + ++S + + + + N + P+ H D ++ LD +GP+YFIS G G
Sbjct: 84 YDSKIDSVLQVTKENYEKCNTQKPLEEHKDGYTTVK---LDVSGPYYFIS-GAPSGNCAK 139
Query: 511 GLKI 522
G K+
Sbjct: 140 GEKV 143
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 27.5 bits (58), Expect = 10.0
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 334 FPASVES-MAIRYPTFTRRNREIPVXLHADNTDRIQNANLDANGPFYFISHGFLEGXHKN 510
+ + ++S + + + + N + P+ H D ++ LD +GP+YFIS G G
Sbjct: 65 YDSKIDSVLQVTKENYEKCNTQKPLEEHKDGYTTVK---LDVSGPYYFIS-GAPSGNCAK 120
Query: 511 GLKI 522
G K+
Sbjct: 121 GEKV 124
>At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 955
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 73 HVVTFARAL*NSRSFCVYENXXR 141
H +FA+ + +SR+FCVYE R
Sbjct: 459 HESSFAKDIASSRTFCVYEEVER 481
>At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain;
Length = 925
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 73 HVVTFARAL*NSRSFCVYENXXR 141
H +FA+ + +SR+FCVYE R
Sbjct: 459 HESSFAKDIASSRTFCVYEEVER 481
>At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 949
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 73 HVVTFARAL*NSRSFCVYENXXR 141
H +FA+ + +SR+FCVYE R
Sbjct: 453 HESSFAKDIASSRTFCVYEEVER 475
>At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 905
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 73 HVVTFARAL*NSRSFCVYENXXR 141
H +FA+ + +SR+FCVYE R
Sbjct: 439 HESSFAKDIASSRTFCVYEEVER 461
>At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 925
Score = 27.5 bits (58), Expect = 10.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 73 HVVTFARAL*NSRSFCVYENXXR 141
H +FA+ + +SR+FCVYE R
Sbjct: 459 HESSFAKDIASSRTFCVYEEVER 481
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,925,423
Number of Sequences: 28952
Number of extensions: 322770
Number of successful extensions: 645
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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