Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0175
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094871-1|AAM11224.1|  256|Drosophila melanogaster RE37682p pro...    86   6e-17
AE014297-2431|AAF55487.1|  256|Drosophila melanogaster CG7785-PA...    86   6e-17
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    32   1.1  

>AY094871-1|AAM11224.1|  256|Drosophila melanogaster RE37682p
           protein.
          Length = 256

 Score = 85.8 bits (203), Expect = 6e-17
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = +3

Query: 255 VCGSGCALGNTPLLQNKAYFEVKLQQGGVWAVGLVTRETDLNRVHGGMDKDSWCLNSDGT 434
           V G+G  L   PL+Q+K+YFEVK+Q GG W+VGL TR+TDL+R  GG D++SWCL SD  
Sbjct: 48  VTGTGGVLATAPLVQSKSYFEVKIQHGGSWSVGLATRQTDLSRKSGGGDRESWCLCSDNA 107

Query: 435 VRSDNVE 455
            R ++ E
Sbjct: 108 TRHNDRE 114



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +2

Query: 587 PLEGDTIGVAYDHVELNFFLNGKNMEIPVRNIQGTGIFQLCTLMTARYWDINXGQFPVSP 766
           P EGD +GVA+DHVELNF+ NGKN+E+P RN++G  +F +  +      DI    F   P
Sbjct: 183 PDEGDIVGVAFDHVELNFYFNGKNLEVPFRNVRGAALFPVIYVGNGAILDIILDNFSHGP 242

Query: 767 TVG 775
             G
Sbjct: 243 PPG 245



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +1

Query: 118 MFCCLKSCMNGFTLT-PSVPVRIKENPVQLDTLHMGNEMVIIKGGQRFVGRAVLLAT 285
           MFCCL++C+NG  +  P+   R++E  V LD  HMG +++++    R  G   +LAT
Sbjct: 1   MFCCLRTCLNGGHIRKPTATSRLREPDVHLDAAHMGPDVILLSHQLRVTGTGGVLAT 57


>AE014297-2431|AAF55487.1|  256|Drosophila melanogaster CG7785-PA
           protein.
          Length = 256

 Score = 85.8 bits (203), Expect = 6e-17
 Identities = 37/67 (55%), Positives = 49/67 (73%)
 Frame = +3

Query: 255 VCGSGCALGNTPLLQNKAYFEVKLQQGGVWAVGLVTRETDLNRVHGGMDKDSWCLNSDGT 434
           V G+G  L   PL+Q+K+YFEVK+Q GG W+VGL TR+TDL+R  GG D++SWCL SD  
Sbjct: 48  VTGTGGVLATAPLVQSKSYFEVKIQHGGSWSVGLATRQTDLSRKSGGGDRESWCLCSDNA 107

Query: 435 VRSDNVE 455
            R ++ E
Sbjct: 108 TRHNDRE 114



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 29/63 (46%), Positives = 39/63 (61%)
 Frame = +2

Query: 587 PLEGDTIGVAYDHVELNFFLNGKNMEIPVRNIQGTGIFQLCTLMTARYWDINXGQFPVSP 766
           P EGD +GVA+DHVELNF+ NGKN+E+P RN++G  +F +  +      DI    F   P
Sbjct: 183 PDEGDIVGVAFDHVELNFYFNGKNLEVPFRNVRGAALFPVIYVGNGAILDIILDNFSHGP 242

Query: 767 TVG 775
             G
Sbjct: 243 PPG 245



 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +1

Query: 118 MFCCLKSCMNGFTLT-PSVPVRIKENPVQLDTLHMGNEMVIIKGGQRFVGRAVLLAT 285
           MFCCL++C+NG  +  P+   R++E  V LD  HMG +++++    R  G   +LAT
Sbjct: 1   MFCCLRTCLNGGHIRKPTATSRLREPDVHLDAAHMGPDVILLSHQLRVTGTGGVLAT 57


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 9  AAALELVDPPGCR 47
          AAALELVDPPGCR
Sbjct: 7  AAALELVDPPGCR 19


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,578,886
Number of Sequences: 53049
Number of extensions: 801805
Number of successful extensions: 1737
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)