Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0174
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.58 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.5  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 385 TVPINSSTLCATRTETGLLC 444
           T+ INS T+C T +  G+ C
Sbjct: 146 TMEINSDTMCVTFSNLGIQC 165


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 189 LPQGTGRFKCSENRN*RSQAKRALDEVFKKYCDKS 293
           +P G     C +     +  K+ L +V++ YC  S
Sbjct: 640 VPSGNSTVDCDDVGTFGAILKKLLPKVYEDYCPTS 674


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 91  FSQITAVVTSQCTKNNAEDKVPEV 162
           F +I   + S  + N  +DK+P++
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQI 226


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 91  FSQITAVVTSQCTKNNAEDKVPEV 162
           F +I   + S  + N  +DK+P++
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQI 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,085
Number of Sequences: 336
Number of extensions: 2691
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)