Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0173
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.3  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 189 LPQGTGRFKCSENRN*RSQAKRALDEVFKKYCDKS 293
           +P G     C +     +  K+ L +V++ YC  S
Sbjct: 640 VPSGNSTVDCDDVGTFGAILKKLLPKVYEDYCPTS 674


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 535 HSGEALFQIKKHVLRFS 485
           HSGE  ++ K  +LRFS
Sbjct: 100 HSGEKPYECKLCLLRFS 116


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 535 HSGEALFQIKKHVLRFS 485
           HSGE  ++ K  +LRFS
Sbjct: 356 HSGEKPYECKLCLLRFS 372


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 385 TVPINSSTLCATRTETG 435
           T+ INS T+C T +  G
Sbjct: 146 TMEINSDTMCVTFSNLG 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,501
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)