Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0173
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   2.4  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   4.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   7.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   7.3  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = -1

Query: 723 TVQSVCLGQTGLARRV 676
           T+Q +C+G+TG ++++
Sbjct: 28  TLQPICVGETGTSQKI 43


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 723 TVQSVCLGQTGLARRV 676
           TVQSVC+ + G A+++
Sbjct: 28  TVQSVCMKEIGTAQQI 43


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 532 SGEALFQIKKHVLRFS 485
           +GE   +IKKH ++F+
Sbjct: 169 NGETYLRIKKHAVKFN 184


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 84  SQHTGSENRYQDSLPHHCNKET 19
           SQ     N+ +    HHCN++T
Sbjct: 51  SQPHQDHNKEKSKNNHHCNQDT 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,801
Number of Sequences: 438
Number of extensions: 3929
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)