Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0172
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.86 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   8.0  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   8.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 603 HARPPSPNILLLDTGIALRXAARLYECEVCLRRFARSD 716
           H    SP+   L   + +    + Y C+VC  RF +S+
Sbjct: 244 HCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSN 281


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = -2

Query: 538 CLTERSKGSSQVAYCFGMVGSALANVVLVDTNYCFATAHLVC 413
           C    ++  +  A CF       A   ++   YC AT H  C
Sbjct: 2   CCAVITRDFAMAAICFSCAEPLEATGCIISCAYCDATFHRGC 43


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 355 LPPVPWYRRTRWC 317
           LPP  W   T+WC
Sbjct: 524 LPPFRWLWSTKWC 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,924
Number of Sequences: 2352
Number of extensions: 19165
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)