Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0172
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical pr...    32   0.40 
AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical ...    32   0.40 
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p...    29   2.8  
Z48543-1|CAA88432.1|  645|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical...    29   2.8  
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical...    29   2.8  
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ...    29   2.8  
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ...    29   2.8  
U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila odd-...    28   6.5  
AC024753-6|AAF60458.2|  407|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z82090-4|CAB05008.2|  543|Caenorhabditis elegans Hypothetical
           protein ZK337.2 protein.
          Length = 543

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 550 SPAPEITYTCETCGQTFTMHDRL 618
           S A ++ Y C  CGQ F +HDRL
Sbjct: 325 SRAKQMQYPCTLCGQAFAVHDRL 347


>AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical
           protein T24C4.2 protein.
          Length = 423

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
 Frame = +1

Query: 283 TKTLVAPGHAEGTSGFVGTMAQAAGSPPNTQNLNKRQRLSRLLDKLSVQLQNNNLYPPTQ 462
           T   V P    G +  V T   +  SP + Q+L  +     +L+++ +    NN+Y P  
Sbjct: 254 TTPFVLPTQKVGLNDLVPT---SQFSPMDYQSLQNQI----ILNQVKLNAMTNNVYNPFG 306

Query: 463 HWPALN------PPFQNNKPPEMSL*ISRLSTSSHSPAPEITYTCE 582
           +WPA +      PPF    P ++S  +S  S+   + AP+I ++ E
Sbjct: 307 NWPASSLVPTPAPPFLTPTPSQVSPALS--SSVDENEAPKIFHSLE 350


>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1032 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1076


>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1026 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1070


>Z48543-1|CAA88432.1|  645|Caenorhabditis elegans Hypothetical
           protein C18D1.1 protein.
          Length = 645

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 523 ISRLSTSSHSPAPEITYTCETCGQTFTMHDRLRQ 624
           I+ + TS      E+T+ C+TC   F   ++LRQ
Sbjct: 347 IANIDTSIKEREGELTFRCDTCRTMFKTRNQLRQ 380


>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1032 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1076


>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1026 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1070


>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
            UNC-26B protein.
          Length = 1113

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1026 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1070


>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
            UNC-26A protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 421  SVQLQNNNLYPPTQHWPALNPP-FQNNKPPEMSL*ISRLSTSSHSPAP 561
            S  L N++ Y   +H P L PP   NNK P  +   +  + S+ SPAP
Sbjct: 1032 SASLANSSWY---EHVPPLAPPQSNNNKSPPQACLFNPFTQSAPSPAP 1076


>U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical
           protein T14G12.6 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 451 PPTQHWPALNPPFQNNKPPEMSL*ISR-LSTSSHSPAPEITYTCETCGQTFTMHDRL 618
           P   + P+   P ++   PE+S      LSTS+ + APE+T       +T T+ ++L
Sbjct: 166 PDDVYIPSTLAPVESTMAPEVSTMTPEGLSTSAETEAPEVTMMTTPAMETSTVTEQL 222


>Z30317-3|CAA82969.1|  930|Caenorhabditis elegans Hypothetical protein
            T16G12.6 protein.
          Length = 930

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 283  TKTLVAPGHAEGTSGFVGTMAQAAGSPPNTQNLNKRQRLSRLLDKLSV 426
            T+TL++ G   GTS  V +M +  G+P N +    R  L+ L D  S+
Sbjct: 884  TRTLIS-GEPYGTSALVTSMFREIGNPRNFKQQTIRFNLAALRDPGSI 930


>U10438-3|AAA19082.2|  242|Caenorhabditis elegans Drosophila
           odd-skipped-like protein1 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 562 EITYTCETCGQTFTMHDRLR-QTYCFSTQESH 654
           E  + CETCG++F   D LR   Y  + ++ H
Sbjct: 153 ERPFHCETCGKSFRRQDHLRDHKYIHAKEKPH 184


>AC024753-6|AAF60458.2|  407|Caenorhabditis elegans Hypothetical
           protein Y23H5B.4 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 486 WWVQRWPMLCWWIQIIVLQLHT*FVEETRETLAFVEILRVWRRACRLCHG 337
           WW   W  + +W+  ++L+L    +     TL    ++    R  RLC G
Sbjct: 214 WWNCDWERINYWMAALILKLIPCLLLTIFMTLLVRMLIEARERRSRLCGG 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,573
Number of Sequences: 27780
Number of extensions: 419391
Number of successful extensions: 1313
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)