Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0168
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   6.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 230  IVEYYNI*FVPCQRETVSHRAWSAE*IYPRLRN 132
            IVEYY + + P   +  +    +++ I P LRN
Sbjct: 1230 IVEYYTVYYKPVSTDDKTEVKPTSQKIVPNLRN 1262


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 645 LYVICSCFPKHCWNITYLTYKM 580
           L ++C C  K       LTY+M
Sbjct: 270 LIILCDCVVKEAQKSLVLTYEM 291


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 80  MRSTFAMITMYVIYVCGR 133
           M+ T  +  ++VIY+CGR
Sbjct: 232 MQLTQLVPALFVIYLCGR 249


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 144 WVDSFCRPRSVTNGFP 191
           WVD  C P+ +  G P
Sbjct: 252 WVDYGCSPKKLIVGIP 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,816
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)