Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0168
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    24   5.9  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.8  
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    23   7.8  

>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 289 DNVQRNDRPDLFLKGLSE 342
           +NVQRND  DL +K +S+
Sbjct: 262 NNVQRNDFVDLLIKMMSK 279


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 614 CLGKQLQITYKITTKRLLAFYIILLI 691
           C    L IT+ IT +R   FY + LI
Sbjct: 222 CDEPYLDITFNITMRRKTLFYTVNLI 247


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 217 TIFDSFRVKGKPLVTERGR 161
           T+FDS R +GKP     G+
Sbjct: 35  TVFDSSRTRGKPFKFSVGK 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,050
Number of Sequences: 2352
Number of extensions: 13303
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)