Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0167
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1364 + 26044559-26044672,26045732-26046334                       31   0.96 
11_06_0289 - 21969248-21973516                                         29   2.9  
11_06_0185 + 21018045-21022307                                         29   2.9  
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583...    29   2.9  
08_02_0921 - 22640125-22640268,22640349-22640423,22640496-226407...    29   3.9  
02_02_0210 + 7873962-7874753                                           29   3.9  
02_02_0209 + 7866348-7867139                                           29   3.9  
04_01_0253 - 3358090-3359052                                           28   5.1  
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076...    27   8.9  

>07_03_1364 + 26044559-26044672,26045732-26046334
          Length = 238

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 288 WPSSEQWRPSYC 253
           WPS E+WRP YC
Sbjct: 68  WPSYEEWRPEYC 79


>11_06_0289 - 21969248-21973516
          Length = 1422

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 354 ALDAXMETHE--EKREAYINELRSRLKDHLXGVEKTXXTLEQQTAEVYKAI 500
           A +  ++TH+  E  +  I +L  RLKDH+   EKT    EQ   E   A+
Sbjct: 386 AKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436


>11_06_0185 + 21018045-21022307
          Length = 1420

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 354 ALDAXMETHE--EKREAYINELRSRLKDHLXGVEKTXXTLEQQTAEVYKAI 500
           A +  ++TH+  E  +  I +L  RLKDH+   EKT    EQ   E   A+
Sbjct: 386 AKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTKKLNEQTGVEEETAV 436


>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
            27059759-27059866,27060314-27060406,27060499-27060669,
            27061505-27061757,27061860-27062138,27062939-27063273,
            27063364-27064332,27064711-27065182,27065243-27065291,
            27066564-27066804,27067606-27067695,27068172-27068294,
            27068365-27068418
          Length = 1175

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 153  YAHRLREYHLVRQTXPSTSLGQRISVDLVSTSMASTFN 40
            Y H + +Y L RQ  P  +   R   DL+S S  S FN
Sbjct: 1000 YVHAIADYKLNRQILPFANAFYRGLGDLISPSWLSLFN 1037


>08_02_0921 -
           22640125-22640268,22640349-22640423,22640496-22640757,
           22642286-22642578,22642609-22642812,22643216-22643901,
           22643958-22644033
          Length = 579

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 276 EQWRPSYCFQATSPLFSCLQL-XLDL 202
           E W P+Y FQ  S LFSC +L  LDL
Sbjct: 105 ELWFPTYNFQLHSCLFSCRELACLDL 130


>02_02_0210 + 7873962-7874753
          Length = 263

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -1

Query: 297 PRSW-PSSEQWRPSYCF--QATSPLFS 226
           PR W P  EQWR  +CF  +  SP+ S
Sbjct: 116 PRQWQPEVEQWRQRHCFAGEDASPVLS 142


>02_02_0209 + 7866348-7867139
          Length = 263

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -1

Query: 297 PRSW-PSSEQWRPSYCF--QATSPLFS 226
           PR W P  EQWR  +CF  +  SP+ S
Sbjct: 116 PRQWQPEVEQWRQRHCFAGEDASPVLS 142


>04_01_0253 - 3358090-3359052
          Length = 320

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = -1

Query: 294 RSW-PSSEQWRPSYCF--QATSPLFS 226
           R W P  EQWR  +CF  +  SP+FS
Sbjct: 174 RQWRPEVEQWRQRHCFAGENASPVFS 199


>09_06_0309 -
           22206812-22206884,22207008-22207103,22207531-22207619,
           22207738-22207820,22207932-22208048,22208132-22208319,
           22208430-22208500,22208570-22208782,22210022-22210081,
           22210186-22210476,22210590-22211894
          Length = 861

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 21/82 (25%), Positives = 31/82 (37%)
 Frame = -2

Query: 608 AGAEPCELXXHVGADASIHXXEXLXALXRQLWSFIFDGLVHFRXXXXXXXXXXLXAXKMI 429
           AG E C +  +   DA+    E L     Q WS   DG +                 + I
Sbjct: 378 AGRERCRVLRYSFGDATSEVVELLPRAVAQWWSEGGDGCIWLASPPPPAIALAPTTIEEI 437

Query: 428 LETGXQLVDVGLAFFLVGLHXG 363
            E G Q+V+  +   L+ +H G
Sbjct: 438 KERGLQVVEPNVQ--LMRIHVG 457


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,510,564
Number of Sequences: 37544
Number of extensions: 173543
Number of successful extensions: 578
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)