Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0167
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p pro...    73   4e-13
AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p pro...    73   4e-13
AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19 ...    73   4e-13
AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13 ...    73   4e-13
AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14 ...    73   4e-13
AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1 p...    73   4e-13
AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-P...    73   4e-13
AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-P...    73   4e-13
AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-P...    73   4e-13

>BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p
           protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 20  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 70


>AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p
           protein.
          Length = 250

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 65  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 115


>AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19
           protein.
          Length = 254

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 84  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 143

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 144 NEQKAIEEK 152



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 17  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 67


>AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13
           protein.
          Length = 174

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 20  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 70


>AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14
           protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 20  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 70


>AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1
           protein.
          Length = 234

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 20  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 70


>AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-PA,
           isoform A protein.
          Length = 250

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 65  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 115


>AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-PB,
           isoform B protein.
          Length = 302

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 132 TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 191

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 192 NEQKAIEEK 200



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 65  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 115


>AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-PC,
           isoform C protein.
          Length = 257

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 303 SRXRXEXTNNFIXATKXALDAXMETHEEKREAYINELRSRLKDHLXGVEKTXXTLEQQTA 482
           +R + E TN FI  TK  L++ ME H EKREA I++++ +LK H   +EKT  TLEQQ A
Sbjct: 87  TRKKDEITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEKTRETLEQQKA 146

Query: 483 EVYKAIEDK 509
              KAIE+K
Sbjct: 147 NEQKAIEEK 155



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +1

Query: 106 RXGLAYEVILAEPV-GVPVPRRADSPEKTPSVEEIQXKLKAAEERRRSLEA 255
           R GL+YEVILAEP   V VP+R  +P K  SVEEI+ KLKAAEERR SLEA
Sbjct: 20  RGGLSYEVILAEPAPNVAVPKRPVTPGKNVSVEEIEQKLKAAEERRISLEA 70


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,423,668
Number of Sequences: 53049
Number of extensions: 272085
Number of successful extensions: 1080
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)