BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0166 (777 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0200 - 15016084-15016342,15016814-15016869,15016963-150179... 31 1.0 08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 30 2.4 02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773... 30 2.4 08_01_0736 - 6745757-6745815,6745858-6746038 29 3.1 11_06_0220 - 21374816-21376849 29 5.4 03_03_0255 + 15894081-15894356,15894565-15894635,15894746-158947... 29 5.4 01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 28 9.5 >07_03_0200 - 15016084-15016342,15016814-15016869,15016963-15017960, 15018707-15018768,15019242-15019274,15019697-15019881, 15020033-15020133,15020783-15020795,15021216-15021319, 15021593-15021693,15022773-15022849,15022965-15023021, 15023158-15023268,15023803-15023859 Length = 737 Score = 31.1 bits (67), Expect = 1.0 Identities = 23/68 (33%), Positives = 31/68 (45%) Frame = -2 Query: 542 FGLSMPSSVCARVLYLEVDLVVLPQRNEFPADS*TGPVFAVPVGNPAIVAQCKSETVSPV 363 FGLS SSV AR ++ + R+ F A GP +G+ A C S V P Sbjct: 188 FGLSGESSVTAREMWGTLSQDGCFDRDNFSA----GPSMPSSLGDTVCAAVCASTWVEPH 243 Query: 362 HKLNIVFS 339 + +VFS Sbjct: 244 GRCTVVFS 251 >08_02_1381 - 26551920-26552053,26552963-26553070,26553154-26553340, 26554107-26554316 Length = 212 Score = 29.9 bits (64), Expect = 2.4 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +3 Query: 303 GDCFPVEFTLILAENYVKLMYRRDGLAFTLSDNGGVAYGDSKDRTSSR 446 GD V F +I A+ Y DG+ + D G DS+D+TS + Sbjct: 44 GDTVHVSFVVIKADT--PWHYSEDGVDLVVKDPNGAQVRDSRDKTSDK 89 >02_05_0492 - 29476883-29476949,29477030-29477166,29477292-29477383, 29477490-29477587,29477677-29477804,29477883-29478026, 29478108-29478397,29478553-29478739,29479085-29479210, 29480488-29480538,29480952-29481002,29482639-29484054 Length = 928 Score = 29.9 bits (64), Expect = 2.4 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = +3 Query: 117 EHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCWSTPTSS 275 EH+ + + D A LI D KG+ + ++ + M+C++ P S Sbjct: 744 EHVIGETSSEEEDDAQNNLALINKDVKGQTMADIFQQVFNATSMDCFTLPVRS 796 >08_01_0736 - 6745757-6745815,6745858-6746038 Length = 79 Score = 29.5 bits (63), Expect = 3.1 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = +3 Query: 243 KMNCWSTPTSSGCKAPRTSSGDCFPVEFTLILAENYVKLMYRRDGLAFTLSDNGGVAYGD 422 + C T ++ +A T+SGD VE LA N+V ++R DG+ LS + D Sbjct: 17 RSRCLGTESAPWNEAGTTASGDTAGVEAEWHLAANHV-CIWRYDGVLHALSSDALSMAAD 75 Query: 423 SKDR 434 + R Sbjct: 76 GRRR 79 >11_06_0220 - 21374816-21376849 Length = 677 Score = 28.7 bits (61), Expect = 5.4 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 Query: 404 AIVAQCKSETVSPVHKLNIVFS*DKCELNRETIPGRCPRSLASRAGRRTPAVHLV 240 A+++ CK+ + I + +KC L E C + RAGR T A HL+ Sbjct: 535 AVLSACKNTGLVEEGMELIKYMQEKCGLKPEIEHISCVVDMLCRAGRLTDAYHLI 589 >03_03_0255 + 15894081-15894356,15894565-15894635,15894746-15894774, 15894865-15895061,15895156-15895368,15895851-15895976, 15896144-15896260,15896546-15896662,15896776-15896869, 15897644-15897723 Length = 439 Score = 28.7 bits (61), Expect = 5.4 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = +2 Query: 437 QFKSQLEIHSAVGEQQGLLQDREHERK 517 Q KSQ ++S +GE++ + +D E E++ Sbjct: 249 QLKSQRSLYSPIGEEEEVTEDEEEEKE 275 >01_05_0653 - 23948911-23948937,23949031-23949141,23949361-23949441, 23949865-23949984,23950088-23950252,23950344-23950493, 23950565-23950674,23951401-23951518,23951597-23951827, 23952345-23952524,23953639-23953908,23954930-23954979, 23955213-23955288,23955396-23955483,23956010-23956101, 23956200-23956529,23957484-23957593,23957810-23957907, 23959538-23959566 Length = 811 Score = 27.9 bits (59), Expect = 9.5 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 386 YIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQ 520 YIE Q +Q+Q Q+ Q H + QQ LLQ +++Q Sbjct: 77 YIETQQAKAEHQKQQQQQYHHQQHQHQQIQMQQMLLQRAAQQQQQ 121 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,625,717 Number of Sequences: 37544 Number of extensions: 343052 Number of successful extensions: 1017 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 993 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1017 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2080154268 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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