BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0166 (777 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6 AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6 AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6 AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor o... 32 2.6 AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver LKB1-intera... 32 2.6 >BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting protein 2 protein. Length = 429 Score = 31.9 bits (69), Expect = 2.6 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544 Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+ Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129 Query: 545 NRNG 556 G Sbjct: 130 MAEG 133 >AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting protein 2 protein. Length = 429 Score = 31.9 bits (69), Expect = 2.6 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544 Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+ Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129 Query: 545 NRNG 556 G Sbjct: 130 MAEG 133 >AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting protein 2 protein. Length = 429 Score = 31.9 bits (69), Expect = 2.6 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544 Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+ Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129 Query: 545 NRNG 556 G Sbjct: 130 MAEG 133 >AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor of NF-kappaB activation-2 protein. Length = 429 Score = 31.9 bits (69), Expect = 2.6 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544 Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+ Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129 Query: 545 NRNG 556 G Sbjct: 130 MAEG 133 >AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver LKB1-interacting protein protein. Length = 429 Score = 31.9 bits (69), Expect = 2.6 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544 Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+ Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129 Query: 545 NRNG 556 G Sbjct: 130 MAEG 133 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 99,284,606 Number of Sequences: 237096 Number of extensions: 1892072 Number of successful extensions: 4356 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4355 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 9423020542 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -