BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0166
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6
AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6
AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting pro... 32 2.6
AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor o... 32 2.6
AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver LKB1-intera... 32 2.6
>BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544
Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+
Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129
Query: 545 NRNG 556
G
Sbjct: 130 MAEG 133
>AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544
Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+
Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129
Query: 545 NRNG 556
G
Sbjct: 130 MAEG 133
>AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544
Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+
Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129
Query: 545 NRNG 556
G
Sbjct: 130 MAEG 133
>AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor of
NF-kappaB activation-2 protein.
Length = 429
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544
Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+
Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129
Query: 545 NRNG 556
G
Sbjct: 130 MAEG 133
>AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver
LKB1-interacting protein protein.
Length = 429
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 365 QARRSRFYIERQWRGCLRGQQRQDQFKSQLEIHSAVGEQQGLLQDREHERKQNLALKVRT 544
Q R R + RQ G Q RQ+ + + E Q LL +HER++ + L R+
Sbjct: 70 QVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRS 129
Query: 545 NRNG 556
G
Sbjct: 130 MAEG 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,284,606
Number of Sequences: 237096
Number of extensions: 1892072
Number of successful extensions: 4356
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4355
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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