Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0164
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   5.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 37  SFSLREDEPRHDDANTARVQSRVRGGRHSLDEVRQ 141
           S++L   E      N   +   V GGRH L+ + Q
Sbjct: 149 SYALTVAETADGRLNATIIADNVFGGRHGLETLNQ 183


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 264 GGNT*WWGVVGRHGTSSRAPR 326
           GG++ +WG +G     SR PR
Sbjct: 196 GGHSGFWGQLGAAVDESRTPR 216


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 171 SGLMARSTPSLSNFIQAMSSPTHSTLYPGSVGVI 70
           SG +   T S  NF    SSP    +Y GS   +
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTV 36


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 171 SGLMARSTPSLSNFIQAMSSPTHSTLYPGSVGVI 70
           SG +   T S  NF    SSP    +Y GS   +
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTV 36


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 171 SGLMARSTPSLSNFIQAMSSPTHSTLYPGSVGVI 70
           SG +   T S  NF    SSP    +Y GS   +
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTV 36


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 171 SGLMARSTPSLSNFIQAMSSPTHSTLYPGSVGVI 70
           SG +   T S  NF    SSP    +Y GS   +
Sbjct: 3   SGGLRNDTYSDDNFSDDESSPLTENIYGGSTRTV 36


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 531 RRVHGSFHEVRGHCRC*TQR*NGDARSVC 617
           R  +G+F      CR  T R N D  +VC
Sbjct: 376 RARNGTFSTTANSCRSSTFRNNRDEYNVC 404


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 481 RRPAGVPLRMESRDWQHGVF 540
           ++ A  P+  E  DW +G+F
Sbjct: 87  KQQANPPISTEHCDWLYGIF 106


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 123 AMSSPTHSTLYPGSVG 76
           A++ PT+++LY G+ G
Sbjct: 269 ALADPTNTSLYAGTYG 284


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 52  EDEPRHDDANTARVQSRVRGGRHSLDEVRQGRRTPG 159
           EDEP H        + + R    S+D+V +  + PG
Sbjct: 222 EDEPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKRPG 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,396
Number of Sequences: 336
Number of extensions: 5273
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)