Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0164
(736 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0099 - 41076056-41076059,41076135-41076175,41076937-410770... 36 0.044
09_02_0112 - 4396756-4397406,4397514-4397717 33 0.31
07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 32 0.54
08_02_0955 + 22994266-22995630 31 1.3
05_03_0082 + 8252844-8253035,8253517-8253792,8253905-8254057 30 1.7
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 30 1.7
04_03_0301 + 14094370-14094584,14096694-14096727,14098084-140980... 30 2.2
05_07_0120 + 27827059-27827814 29 2.9
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 29 2.9
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 29 2.9
02_05_0278 + 27404914-27404947,27405088-27405228,27405747-274057... 29 2.9
06_03_1122 - 27775141-27775333,27775414-27775604,27775907-277770... 29 3.8
06_02_0153 - 12319853-12319948,12320277-12320536,12320920-12320977 29 3.8
04_01_0477 - 6221990-6223224,6227722-6228817 29 3.8
02_05_1314 - 35661824-35661912,35662031-35662454,35662689-356627... 29 3.8
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 29 3.8
01_06_0922 - 33022709-33023545 29 3.8
01_01_1195 - 9567023-9567789,9567871-9568120 29 3.8
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 3.8
09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157 29 5.1
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 29 5.1
03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478 29 5.1
03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676 29 5.1
02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216 29 5.1
12_02_0783 + 23125786-23126037,23126867-23127784 28 6.7
09_02_0612 + 11239675-11240140,11240587-11240687 28 6.7
08_01_0305 - 2555227-2555635,2555785-2556254 28 6.7
05_04_0188 - 18883979-18884250,18885046-18885666,18885762-188858... 28 6.7
03_05_0410 + 23964223-23964267,23964654-23965853 28 6.7
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135... 28 6.7
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 28 8.8
05_01_0397 - 3129679-3130144,3130655-3131104,3132215-3132273,313... 28 8.8
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931... 28 8.8
02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429... 28 8.8
>01_07_0099 -
41076056-41076059,41076135-41076175,41076937-41077041,
41077476-41077552,41078773-41078944,41079099-41079194,
41080268-41080465
Length = 230
Score = 35.5 bits (78), Expect = 0.044
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = -1
Query: 571 QWPRTSWKLP*TRRAASPATPYEAARRPAVCRPAGWRISAHPPSSPTHRLSWDTALP 401
QW RT LP R A+ A+P A R+PAV P G +S P T RLS LP
Sbjct: 31 QWLRTLSSLP--RDPAAAASPAPAPRQPAVGSPLG--LSKIPGYEQTSRLSGTQVLP 83
>09_02_0112 - 4396756-4397406,4397514-4397717
Length = 284
Score = 32.7 bits (71), Expect = 0.31
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Frame = +1
Query: 214 ESDSNGDGIQKHRVTNVAETP---DGGVWWEGMGPAPERLVDWKGQPWDPSKKTPAAHPN 384
E + G+Q R VA+ P GG E + P V+ G P ++ PAAH
Sbjct: 124 EGELQRGGVQSERAGVVADVPVEAPGGTHGEVLRPVG---VELDGDVPRPRQRAPAAHAV 180
Query: 385 SRFCTPAEQCPMIDGEWESSEGVP-ISAI----LLGGRRPAGVPLRMESRDWQHGVFMGA 549
+ P + ++DG+ + E P ++ I L G A P E R + GV G
Sbjct: 181 AVRGDPGARAVVVDGDADGLEAQPAVAGIIRLGLAGEECGADNPAVEERRRVEPGVAAGD 240
Query: 550 SMRSEATA 573
+ E A
Sbjct: 241 GVADEEGA 248
>07_01_0389 -
2915191-2915604,2915696-2915752,2915867-2915922,
2916053-2916113,2916243-2916365,2916505-2916537,
2916617-2916709,2916839-2916934,2917025-2917203,
2917344-2917530,2918051-2918184,2918311-2918518,
2918598-2918633,2918785-2919241,2919633-2919736,
2920489-2920569,2920646-2920697,2920837-2920876,
2920991-2921085,2921241-2921383,2921899-2922006,
2922120-2922221,2922302-2922348,2922425-2922554,
2923173-2923304,2923404-2923616,2923709-2923963,
2924053-2924799
Length = 1460
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -3
Query: 620 IANGSCITILPLCSAAAVASDLMEAPMNTPCCQS-----RDSIRSGTPAGRLPPSRMADI 456
+A C ++PL A+ S L AP + RD + +G A P+R+ +
Sbjct: 50 LAEAGCTLLVPLHQPPALPSPLSFAPRLARALAAADAALRDRLLAGLAAFAESPARLRQL 109
Query: 455 GTPSELSHSPSI 420
P+ +HSPS+
Sbjct: 110 LLPTSAAHSPSL 121
>08_02_0955 + 22994266-22995630
Length = 454
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -1
Query: 511 PYEAARRPAVCRPAGWRISAHPPSSPTHRLSWDTALPGCRTWNLDVQPEFSCWGPRVDPS 332
P +A+RRPA R S P SSPT P R WN Q E + +
Sbjct: 153 PMDASRRPAAASSQSQRRSKRPRSSPTQHSPEQHKRPP-RVWN--PQDEVTILRALISYR 209
Query: 331 SRRGAL 314
++ GAL
Sbjct: 210 AKNGAL 215
>05_03_0082 + 8252844-8253035,8253517-8253792,8253905-8254057
Length = 206
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -2
Query: 534 AVLPVPRLHTKRHAGRPSAAQQDGGYRHTLRALPLTVYHGTLLCR 400
A+LP+PR+ +HA A + +GG ++ L T TLLCR
Sbjct: 133 AILPMPRVPYPKHAIGDDAIEGNGG-NSLIKPLRSTRQCSTLLCR 176
>03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +1
Query: 205 SRYES--DSNGDGIQKHRVTNVAETPDGGVWWEG-MGPAPERLVDWKGQPWD----PSKK 363
+R+E+ D N K +V E +GG WWEG + + +D+ PW+ K
Sbjct: 1153 TRFEASIDRNWTNRDKCKVWWRNELEEGGSWWEGRVSAVKPKSLDFPESPWEKYVIQYKN 1212
Query: 364 TPAAHPNS 387
+ HP+S
Sbjct: 1213 DGSDHPHS 1220
>04_03_0301 +
14094370-14094584,14096694-14096727,14098084-14098095,
14098400-14098574,14099064-14099299,14099396-14100457
Length = 577
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/85 (25%), Positives = 33/85 (38%)
Frame = -2
Query: 387 GIWMCSRSFLAGVPGLTLPVDEALWSWSHAFPPHPTIRCFRHVSDTVFLNTVAIAIGFVA 208
G+ C R +AG TL E L+ H I CF V++ +FL V F+
Sbjct: 43 GLGKCQRELMAGASWHTLGEHEHLFPQIKRVDIHE-IGCFCEVTEEIFLGGVLNFCNFMR 101
Query: 207 ADVPGATPKNPFSGLMARSTPSLSN 133
+ P S + +P+ N
Sbjct: 102 RILKSFVMVKPSSLVQTNQSPTCPN 126
>05_07_0120 + 27827059-27827814
Length = 251
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +3
Query: 447 GCADIRHPAGRQTAGRRAASYGVAGLAA 530
G AD HPAG A RAA +GVA L A
Sbjct: 221 GSAD--HPAGAAPAAARAAGWGVAALLA 246
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 343 PWDPSKKTPAAHPNSRFCTPAEQCP--MIDGEWESSE 447
PW ++ TP +H + +F P E C ++D +W SE
Sbjct: 149 PW--TQPTPCSHVDLKFPVPPEHCTSGIMDNKWRRSE 183
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 608 SCITILPLCSAAAVASDLMEAPMNTP 531
+C +IL LCSAAA AS A N P
Sbjct: 70 TCASILRLCSAAAAASGTAAASSNLP 95
>02_05_0278 +
27404914-27404947,27405088-27405228,27405747-27405772,
27406036-27406071,27406296-27406976
Length = 305
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -1
Query: 628 TDASQTDRASPFYRCVQQRQWPRTSWKLP*TRRAASPATPYEAARR-PAVCRPAGWRISA 452
T + T R++P RC R R S P RRA+ P +A R + R A
Sbjct: 241 TRTTSTPRSAP--RCASARAASRRSSAAPARRRASEPRPRVSSAMRVRGLARGARGCSRR 298
Query: 451 HPPSSP 434
PP+SP
Sbjct: 299 RPPASP 304
>06_03_1122 -
27775141-27775333,27775414-27775604,27775907-27777099,
27777206-27777353,27777534-27777609,27777696-27777818,
27777886-27778050,27778169-27778259,27778580-27778664,
27778745-27778900,27778992-27779048,27779138-27779236,
27779381-27779499,27780145-27780202
Length = 917
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 166 PGKRVLWSCTRYISRYESDSNGDGI 240
PGKR+ SC Y+SR ES S GI
Sbjct: 885 PGKRLGSSCDDYVSRQESRSLSTGI 909
>06_02_0153 - 12319853-12319948,12320277-12320536,12320920-12320977
Length = 137
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 134 TSSRLCRPPRTLLCTRAVLASSWRGSSSRKLKEKRQ 27
T+S L P R + RA+ AS W R LK+ RQ
Sbjct: 47 TTSCLASPTRHVAAERAIPASMWPTEVERVLKQHRQ 82
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 348 PGLTLPVDEALWSWSHAFPPHPTIRC 271
PGL LP + +W PP P +RC
Sbjct: 14 PGLPLPEELVVWEILVRLPPKPLLRC 39
>02_05_1314 -
35661824-35661912,35662031-35662454,35662689-35662787,
35662886-35662995,35663263-35663516,35664080-35664098,
35664834-35665075,35665662-35666401
Length = 658
Score = 29.1 bits (62), Expect = 3.8
Identities = 27/107 (25%), Positives = 38/107 (35%)
Frame = -3
Query: 599 TILPLCSAAAVASDLMEAPMNTPCCQSRDSIRSGTPAGRLPPSRMADIGTPSELSHSPSI 420
T LP S AA ++ P P + R T PP R A + + H+P +
Sbjct: 8 TPLPPPSLAAASTSSCFLPSLLPIRRRRWPTPKATATAAFPPRRPAPLSANNLPLHTPGV 67
Query: 419 MGHCSAGVQNLEFGCAAGVFLLGSQG*PFQSTRRSGAGPMPSHHTPP 279
S + F A+G F P S R+ G + PP
Sbjct: 68 SETTSTSTSSTTF--ASGTFRGAGGEDPLVSKLRTQLGVIHPLPAPP 112
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = +3
Query: 351 PQQE-NSGCTSKFQVLHPGRAVSHDRR*VGELGGCADIRHPAGR---QTAGRRAASYG 512
PQ N K + + GR + +RR +GE+G ++R P G+ Q R A++G
Sbjct: 15 PQNRGNVAALGKQKAVVAGRPDAKNRRALGEIGNVMNVRLPEGKPLQQAPAGRTANFG 72
>01_06_0922 - 33022709-33023545
Length = 278
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = -1
Query: 622 ASQTDRASPFYRCVQQRQWPRTSWKLP*TRRAASPATPYEAARRPAVCRPAGWRISAHPP 443
AS R R V++ P + P RRAASPA P + P RP+ R+ PP
Sbjct: 166 ASPPPRREQRDRSVRRSPSPAAK-RTPEQRRAASPA-PSLQRKPPVPVRPSPRRVQEAPP 223
Query: 442 S 440
S
Sbjct: 224 S 224
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 608 SCITILPLCSAAAVASDLMEAPMNTPCCQSRDSIR---SGTPAGRLP 477
+C T L L S +A A+ A N PCC + + R S T A R P
Sbjct: 211 TCTTDLSLSSGSAAAAAAAAAAANIPCCFYQSTPRASSSSTAACRAP 257
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 161 INPENGFFGVAPGTSAATNPIAMA----TVFKNTVSLTWRKHLMVGCGGKAWDQLQSASS 328
I ENG F G+S AT P+++A T + + +KHL G A D+++S S
Sbjct: 695 IERENGSFNSQDGSSVATGPLSVAFGFVTRLASELFARGKKHL-DGSNSDAMDEVESHQS 753
>09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157
Length = 278
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 462 RHPAGRQTAGRRAASYGVA 518
RHP G+ TAGRR AS VA
Sbjct: 189 RHPLGKGTAGRRRASCEVA 207
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Frame = -1
Query: 559 TSWKLP*TRRAASPATPYEAARRPAVCRPAGWRISAHPPSSPTHRLSWDTALPGCRTWN- 383
T WK R S P+ R WR++ + +R+ T G TW
Sbjct: 1346 TIWKERNNRVFNSQQRPWSEIARAMAAEATLWRLAHAALPTLFNRMKCTTLFEG--TWAS 1403
Query: 382 ----LDVQPEFSCWGPRVDPS---SRRGALELVPCLP 293
L++ W P V + S G LELVPC P
Sbjct: 1404 SLSCLEILQHIQIWRPGVLKTYHESFAGDLELVPCKP 1440
>03_05_0826 - 27994004-27994966,27995053-27996030,27996101-27996478
Length = 772
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 596 ILPLCSAAAVASDLMEAPMNTPCCQSRDSIRSGTPAGRLPPSRMADIGTPS 444
+LP+ S+ A + A +TP RS P PPS + D G S
Sbjct: 267 VLPIASSGVRAVFIGRARTSTPTPPHAKPARSAAPRAHRPPSSVMDSGYSS 317
>03_01_0388 + 3018192-3018312,3018969-3019257,3019364-3019676
Length = 240
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -1
Query: 196 WCNSKEPVFRVNGPEYAVLVELHPGYVVPHALYFVPGQCWRHHG 65
WCN+ P F ++ P + + ++ +VP + + +CWR+ G
Sbjct: 105 WCNATRPYFDMSQPAWE-NIGIYSAGIVP--ILYQQVKCWRYGG 145
>02_05_1166 - 34633770-34634301,34634559-34635181,34635279-34637216
Length = 1030
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 565 PRTSWKLP*TRRAASPATPYEAARRPAVCRPAGWRISAHPPSSPTHRLSWDTA 407
P + P T +A S ++ +ARR AG SA PS PT + W T+
Sbjct: 13 PAAAGSRPLTPKAFSASS---SARRTPAAAAAGKENSASKPSKPTAAVRWSTS 62
>12_02_0783 + 23125786-23126037,23126867-23127784
Length = 389
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 538 TRRAASPATPYEAARRPAVCRPAGWRISAHPPSSPT 431
TR A + A PY A WR+ PP +PT
Sbjct: 142 TRLAVALALPYRHATLLLAATGQSWRLRGSPPPTPT 177
>09_02_0612 + 11239675-11240140,11240587-11240687
Length = 188
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 467 SCWAADGRPACRFVWSRGTGSTACSW 544
+ WA P R WSRG+ S +W
Sbjct: 74 AAWAPQSAPPARSSWSRGSASMVRAW 99
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 473 WAADGRPACRFVWSRGTGSTACSW 544
W + P R WSRG+ ST +W
Sbjct: 99 WVSQPAPPVRSSWSRGSASTVRAW 122
>08_01_0305 - 2555227-2555635,2555785-2556254
Length = 292
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 232 DGIQKHRVTNVAETPDGGVWWEGMGPAPERLV 327
DG + R+ T GGVWW +G R+V
Sbjct: 100 DGATRRRLRRRWHTAGGGVWWRWLGMHGGRVV 131
>05_04_0188 -
18883979-18884250,18885046-18885666,18885762-18885887,
18886007-18886265
Length = 425
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 535 RRAASPATPYEAARRPAVCRPAGWRISAHPPSSPTHRLSW 416
++A+S Y+ + +P V R + W + PP SP H+ W
Sbjct: 2 QQASSHQHHYQHSAKPPVSRSSSWIRRSPPP-SPPHKKLW 40
>03_05_0410 + 23964223-23964267,23964654-23965853
Length = 414
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -1
Query: 139 VELHPGYVVPHALYFVPGQ--CWRHHGEVRLP 50
VE PG VVP F + WR HG+ +LP
Sbjct: 197 VEQSPGVVVPATFSFRTAEPMMWRRHGQWQLP 228
>03_02_0750 +
10909130-10909616,10912257-10912916,10913139-10913544,
10914376-10914757,10914918-10915679,10916106-10916165,
10916695-10917105
Length = 1055
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +3
Query: 444 GGCADIRHPAGRQTAGRRAASYGVAGLAARRV 539
GGC R AG GR AS VA LAA V
Sbjct: 230 GGCCRRRGGAGAGGGGRGTASLAVAALAAAAV 261
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = -1
Query: 574 RQWPRTS-WKLP*--TRRAASPATPYEAARRPAVCRPAGW---RISAHPPSSPTHRLSWD 413
RQW T+ W +P RRA +P RRPA RP + + H T R W
Sbjct: 545 RQWGSTAPWVVPRCGVRRAKAPGLVLLLCRRPAEPRPPSYPFFHLVGHGVFPGTGRSGWG 604
Query: 412 TA 407
A
Sbjct: 605 AA 606
>05_01_0397 -
3129679-3130144,3130655-3131104,3132215-3132273,
3133136-3133305,3134655-3134771,3134980-3135166
Length = 482
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +3
Query: 273 T*WWGVVGRHGTS--SRAPRRLEGSTLG 350
T WW HGTS + APRRL G +G
Sbjct: 431 TNWWSSQQSHGTSEPAPAPRRLFGQWIG 458
>02_05_0118 -
25991356-25991686,25991797-25992092,25992405-25993109,
25993197-25993298,25993519-25993846,25994337-25994461,
25994555-25994628,25995110-25995191,25995278-25995391,
25995475-25995575,25995663-25995752,25996316-25996562
Length = 864
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 288 VVGRHGTSSRAPRRLEGSTLGPQQENSGCT--SKFQVLHPGRAVSHDRR 428
V+GR SR+ R L GST+ E CT ++ V PGR V RR
Sbjct: 546 VIGR----SRSCRSLTGSTMFDDMEMDDCTPLNRSLVEFPGRPVESHRR 590
>02_05_0113 -
25941189-25941519,25941630-25941925,25942238-25942942,
25943030-25943131,25943352-25943679,25944170-25944294,
25944388-25944453,25945046-25945109,25945739-25945821,
25945917-25945943
Length = 708
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 288 VVGRHGTSSRAPRRLEGSTLGPQQENSGCT--SKFQVLHPGRAVSHDRR 428
V+GR SR+ R L GST+ E CT ++ V PGR V RR
Sbjct: 390 VIGR----SRSCRSLTGSTMFDDMEMDDCTPLNRSLVEFPGRPVESHRR 434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,370,423
Number of Sequences: 37544
Number of extensions: 715858
Number of successful extensions: 2722
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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