Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0164
(736 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g50750.1 68416.m05554 brassinosteroid signalling positive reg... 33 0.15
At5g34855.1 68418.m04092 hypothetical protein 31 0.60
At5g11320.2 68418.m01322 flavin-containing monooxygenase family ... 29 2.4
At5g11320.1 68418.m01321 flavin-containing monooxygenase family ... 29 2.4
At5g28500.1 68418.m03469 expressed protein predicted proteins, A... 29 4.2
At5g41590.1 68418.m05053 hypothetical protein contains Pfam prof... 28 5.6
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 5.6
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 28 7.4
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic... 28 7.4
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic... 28 7.4
At2g31020.1 68415.m03782 oxysterol-binding family protein simila... 27 9.8
At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly ident... 27 9.8
>At3g50750.1 68416.m05554 brassinosteroid signalling positive
regulator-related contains similarity to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 276
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = -1
Query: 526 ASPATPYEAARRPAVCRPAGWRISAHP---PSSPTHRLSWDTALPGCRTWNLDVQPEFSC 356
++P TP ++ R + R W+ S P PSSPT RL T++P C DV SC
Sbjct: 155 SAPVTPPISSPRRSNPRLPRWQSSNFPVSAPSSPTRRLHHYTSIPECD--ESDVSTVDSC 212
Query: 355 -WG 350
WG
Sbjct: 213 RWG 215
>At5g34855.1 68418.m04092 hypothetical protein
Length = 425
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = -1
Query: 535 RRAASPATPYEAAR--RPAVCRPAGWRISAHPPSSPTHRLSW----DTALPGCRTWNLDV 374
R ++S A P+ R A P+ A P P HR W + +P R W DV
Sbjct: 13 RPSSSSAVPHHRQRFSTAASLLPSQPESQAAAPQPPVHRFPWPKLPNERIPSQRVWEKDV 72
Query: 373 QPEFS 359
EF+
Sbjct: 73 NKEFT 77
>At5g11320.2 68418.m01322 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 357
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 194 PGTSAATNPIAMATVFKNTVSLTWRKHLMVGCGGKAWD 307
PG T P+ + +K+ + RK L+VGCG +
Sbjct: 153 PGLKKFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGME 190
>At5g11320.1 68418.m01321 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 411
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 194 PGTSAATNPIAMATVFKNTVSLTWRKHLMVGCGGKAWD 307
PG T P+ + +K+ + RK L+VGCG +
Sbjct: 153 PGLKKFTGPVVHTSAYKSGSAFANRKVLVVGCGNSGME 190
>At5g28500.1 68418.m03469 expressed protein predicted proteins,
Arabidopsis thaliana and Synechocystis sp.
Length = 434
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 620 IANGSCITILPLCSAAAVASDLMEAPM 540
+A S + +LP+C A L+EAPM
Sbjct: 283 VAGASSVVVLPVCKAEEGEEKLLEAPM 309
>At5g41590.1 68418.m05053 hypothetical protein contains Pfam profile
PF04525: Protein of unknown function (DUF567)
Length = 221
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 191 APGTSAATNPIAMATVFKNTVSLT-WRKHLMVGCGG 295
AP ++ +T +A A + +LT WRK L+V C G
Sbjct: 17 APSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEG 52
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 525 PVPRLHTKRHAGRPSAAQQDGGYRHTLRALPLTVYHGTLLC 403
P+P + K S+ Q +G L +P T + G LLC
Sbjct: 174 PIPEIKIKLQQFNVSSNQLNGSIPDPLSGMPKTAFLGNLLC 214
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 271 TPDGGVWWEG-MGPAPERLVDWKGQPWD 351
T +GG WWEG + + + D+ PW+
Sbjct: 1423 TGEGGAWWEGRIESSQVKSTDFPESPWE 1450
>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 162
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 590 PLCSAAAVASDLMEAPMNTPCCQSRDSIRSGTPAGR---LPPSRMADIGTPSELSHSPS 423
P S AA + EAP TP ++ S TPA PP+ + TPS +PS
Sbjct: 44 PAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPS 102
>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 185
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -3
Query: 590 PLCSAAAVASDLMEAPMNTPCCQSRDSIRSGTPAGR---LPPSRMADIGTPSELSHSPS 423
P S AA + EAP TP ++ S TPA PP+ + TPS +PS
Sbjct: 44 PAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPASTPQISPPAPSPEADTPSAPEIAPS 102
>At2g31020.1 68415.m03782 oxysterol-binding family protein similar
to SP|Q969R2 Oxysterol-binding protein 2 {Homo sapiens};
contains Pfam profiles PF00169: PH domain, PF01237:
Oxysterol-binding protein
Length = 760
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 529 AASPATPYEAAR-RPAVCRPAGWRISAHPPSSPTHRL 422
AA+P TP+ +AR +P + R R + HP S H L
Sbjct: 3 AATPETPFGSARSQPVITRSVSQRYN-HPGQSNHHHL 38
>At2g26430.1 68415.m03171 ania-6a type cyclin (RCY1) nearly
identical to ania-6a type cyclin [Arabidopsis thaliana]
GI:13924511
Length = 416
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 584 CSAAAVASDLMEAPMNTPCCQSRDSIRSGTPAGRLP 477
C+A + +DL + + TP ++ DS +SGT + P
Sbjct: 287 CTAGSANNDLKDGMVTTPHEKATDSKKSGTESNSQP 322
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,274,688
Number of Sequences: 28952
Number of extensions: 478434
Number of successful extensions: 1514
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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