Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0163
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1026 + 22400551-22401161,22401437-22401632,22401837-224018...    31   1.4  
09_04_0417 + 17404433-17405392                                         28   7.3  

>10_08_1026 +
           22400551-22401161,22401437-22401632,22401837-22401889,
           22402369-22402819
          Length = 436

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +2

Query: 584 DTPKVPGNNGLRDMVTLLRWGEXGTPEPWEVN----PXQRDLWRGXSAWXP 724
           D P   GN+  R ++    WGE G PEP   +    P   D W G  A  P
Sbjct: 83  DDPSASGNS--RPVLVTDEWGEPGVPEPQSTSAADPPTNDDEWGGDPAPPP 131


>09_04_0417 + 17404433-17405392
          Length = 319

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
 Frame = +2

Query: 278 LDATEEGPVCYQTDVLYGSLMKPHGMDEAC-IYANIHVPLNALPAAGXTPTKPGLPIXVF 454
           L  TE  P  +  D   G   K   +D+A  + A +++P   LPA+G    +  LPI V+
Sbjct: 26  LFGTETTPAGF--DGATGVTSKDVVIDDATGVSARLYIP--DLPASGPGHHRKKLPIVVY 81

Query: 455 IHXXXXXXXXXXXDLYG---PSILSTRNVVVITFNYRL 559
            H             Y     S++S    + ++ NYRL
Sbjct: 82  FHGGGMVLDSAASPTYHRYLNSLVSKAGALAVSVNYRL 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,895,870
Number of Sequences: 37544
Number of extensions: 438588
Number of successful extensions: 1007
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)