Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0163
(785 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_23484| Best HMM Match : COesterase (HMM E-Value=0) 58 1e-08
SB_56819| Best HMM Match : COesterase (HMM E-Value=0) 56 2e-08
SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4) 56 2e-08
SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45) 52 7e-07
SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_38136| Best HMM Match : COesterase (HMM E-Value=0) 51 1e-06
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 50 3e-06
SB_56597| Best HMM Match : COesterase (HMM E-Value=0) 50 3e-06
SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21) 42 7e-04
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 35 0.086
SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 33 0.35
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 29 4.3
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 28 7.5
>SB_43484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 58.4 bits (135), Expect = 6e-09
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLP 442
PWT +A G +C Q Y + K M E C+ N+ VP N AAG +
Sbjct: 19 PWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVPNNT--AAGAMKS----- 71
Query: 443 IXVFIHXXXXXXXXXXXDLYGPSILSTR-NVVVITFNYRLNFFGFFSLDTPKVPGNNGLR 619
+ V+I+ LY SIL+ +V+V+ NYR+ FGF + + GN G+
Sbjct: 72 VMVWIYGGGFMNGANR--LYESSILAGEGDVIVVVVNYRVGIFGFLATGKNGLTGNYGML 129
Query: 620 DMVTLLRW 643
D V L+W
Sbjct: 130 DQVKSLQW 137
>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
Length = 586
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Frame = +2
Query: 281 DATEEGPVCYQTDVLYGSLMK-------PHGMDEACIYANIHVPLNALPAAGXTPTKPGL 439
+ATE +C Q+ YG + E C+Y NI+ P P
Sbjct: 82 EATEFKDICTQSYRHYGGSINNAWPTFTEKRFSEDCLYLNIYTP-------SINPDGTHY 134
Query: 440 PIXVFIHXXXXXXXXXXXDLYGPSILSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNGLR 619
P+ +IH D+ L R +V++T YRL FGF + + PGN GL
Sbjct: 135 PVIFYIHGGGFFAGTPIRDVTPGEFLPLRGIVLVTVQYRLGIFGFLTTGDAEAPGNAGLL 194
Query: 620 DMVTLLRW 643
D V L+W
Sbjct: 195 DQVEALQW 202
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Frame = +3
Query: 123 VAQTESGWVXGRTRRAEAS------TLYASFRGVPYAKQPVGELXFK 245
+ +T+ G+V G ++ +A T+Y F GVPYA+ PV L FK
Sbjct: 23 LVRTKQGYVRGLRQQFDAKSEDNVDTVY-KFLGVPYAEPPVKNLRFK 68
>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
Length = 613
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +2
Query: 338 MKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLY-GPSI 514
+ P M E C++ N+ P AG TK LP+ VFIH D+Y G +
Sbjct: 164 LNPDSMSEDCLFLNVFRP------AGTKATKD-LPVMVFIHGGGYYRGSG--DVYDGTPL 214
Query: 515 LSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
+ +V+V+T NYRL GF + V GN + D + L+W
Sbjct: 215 AAYNDVIVVTMNYRLGLLGFLHVAGTDVTGNYAMYDQILALKW 257
>SB_10885| Best HMM Match : COesterase (HMM E-Value=1.4)
Length = 195
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLP 442
PWT DA G +C Q Y + M E C+ ++ VP N AAG +
Sbjct: 70 PWTSTRDAFVNGKMCPQDLTEYMEQFTTNDMSEDCLNLDMFVPNNT--AAGAMKS----- 122
Query: 443 IXVFIHXXXXXXXXXXXDLYGPSILSTR-NVVVITFNYRLNFFGFFSLDTPKVPGNNGLR 619
+ V+I+ LY S++S +V+V+ NYR+ FGF + V GN G+
Sbjct: 123 VMVWIYGGAFVSGANR--LYDGSVISGEGDVIVVVVNYRVGIFGFLATGKNGVTGNYGML 180
Query: 620 DMVTLLRW 643
D V L+W
Sbjct: 181 DQVKSLQW 188
>SB_9981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/197 (23%), Positives = 72/197 (36%), Gaps = 12/197 (6%)
Frame = +2
Query: 89 PSSVAAVVVQCGRADGVRLGVWPYSPGGSKHFIRQFPGSALCQXXXXXXXXXXXXXXXPW 268
PS+ V++ + L S G I +F G Q PW
Sbjct: 82 PSNTEDVIINTKYGKVLGLAQTLASAQGPARKINKFLGIPYAQQPIGDLRFKPPQPLKPW 141
Query: 269 TDYL-DATEEGPVCYQTDVLYGSL----------MKPHGMDEACIYANIHVPLNALP-AA 412
+ + +AT G +C Q+ + + L M E C+ NI+ P A P +
Sbjct: 142 KEKIYNATSFGNICVQSKLYFEFLKSSIRRTWPDFSKKNMREDCLNLNIYTP--AWPDIS 199
Query: 413 GXTPTKPGLPIXVFIHXXXXXXXXXXXDLYGPSILSTRNVVVITFNYRLNFFGFFSLDTP 592
T+ P+ +IH I +V++T +YRL GF +
Sbjct: 200 DSVQTRKAYPVLFYIHGGSYYLGTPNRVKTPGEIAPQYGIVLVTIHYRLGVLGFLTTGDV 259
Query: 593 KVPGNNGLRDMVTLLRW 643
+ PGN G+ D + LRW
Sbjct: 260 EAPGNAGMLDQIQALRW 276
>SB_33198| Best HMM Match : 7tm_1 (HMM E-Value=9.80909e-45)
Length = 762
Score = 51.6 bits (118), Expect = 7e-07
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQ-TDVLYGSLMK--PHGMDEACIYANIHVPLNALPAAGXTPTKP 433
P +L+ EG Q T + SL+ P + E C+Y NI+ P ++
Sbjct: 470 PTHSFLNIRREGGTGNQGTAIALKSLLCVIPDTVSEDCLYLNIYRPAHS---------HH 520
Query: 434 GLPIXVFIHXXXXXXXXXXXDLYGPSILSTRN-VVVITFNYRLNFFGFFSLDTPKVPGNN 610
LP+ V++H + Y S+LS+ N ++V+T N+RL FGF + + GN
Sbjct: 521 RLPVMVWLHGGGNYVGSG--NWYHSSVLSSHNDIIVVTLNHRLALFGFLYISGTDLAGNY 578
Query: 611 GLRDMVTLLRW 643
G D V L+W
Sbjct: 579 GYLDQVQALKW 589
>SB_37257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 51.2 bits (117), Expect = 9e-07
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +2
Query: 359 EACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLYGPSILSTRN-VV 535
E C+ +++ P N+ P + VFIH Y PS+L N V+
Sbjct: 157 EDCLTISVYTPQNSDPDKQRA-------VMVFIHGGGFTSGASRD--YDPSVLVALNDVI 207
Query: 536 VITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
V+T NYRL GFF++ + GN GL D V L+W
Sbjct: 208 VVTINYRLGVLGFFNIPDTEYKGNYGLLDQVLALQW 243
Score = 35.5 bits (78), Expect = 0.049
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 117 NVVAQTESGWVXGRTRRAEASTLYASFRGVPYAKQPVGELXF 242
++V QT +G V GR FR +PYA+ PVG+L F
Sbjct: 38 HLVVQTLAGAVRGRLNPVVHGLQVRQFRAIPYAQPPVGKLRF 79
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 185 IRQFPGSALCQXXXXXXXXXXXXXXXPWTDYLDATEEGPVCYQ-TDVLYGSLM 340
+RQF Q PW+ DAT+ GPVC Q D +G ++
Sbjct: 61 VRQFRAIPYAQPPVGKLRFAAPLPAKPWSGVRDATQHGPVCPQLPDEEFGKML 113
>SB_38136| Best HMM Match : COesterase (HMM E-Value=0)
Length = 590
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/130 (30%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQTDVLYGSLMKPH---GMDEACIYANIHVPLNALPAAGXTPTKP 433
PW D DAT +C+Q D Y + + C+Y NI+ P T TK
Sbjct: 81 PWDDVYDATNFKAMCFQ-DPEYNRMFWTGFSWRQSDDCLYLNIYAP-------NSTGTK- 131
Query: 434 GLPIXVFIHXXXXXXXXXXXDLYGPSILSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNG 613
+ V+IH G +I VV++T YRL FGF S PGN G
Sbjct: 132 -YAVMVYIHGGGYEAGSPIISP-GDAI-PLWGVVLVTIQYRLGPFGFMSTGDSVAPGNYG 188
Query: 614 LRDMVTLLRW 643
+ D + L+W
Sbjct: 189 MLDQIAALKW 198
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/95 (31%), Positives = 43/95 (45%)
Frame = +2
Query: 359 EACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLYGPSILSTRNVVV 538
E C+ N+H P +A LP+ V+I D+ G + S + VVV
Sbjct: 335 EDCLTLNVHTPHDA-------NENSSLPVLVYI-GGDFFVAGSSNDVDGSVLASNQKVVV 386
Query: 539 ITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
+TFNYRL FGF + N G+ D +L+W
Sbjct: 387 VTFNYRLGAFGFLGNSKINISQNLGVEDAKAVLKW 421
>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
Length = 505
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/107 (28%), Positives = 47/107 (43%)
Frame = +2
Query: 323 LYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLY 502
+Y L + E C++ N++ P T LP+ V+IH
Sbjct: 32 MYRILCSSDTISEDCLFLNVYRP---------TKFNHKLPVMVWIHGGGYYHATANW-FD 81
Query: 503 GPSILSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
G + S NV+V+T NYRL GF + ++ GN G+ D V L+W
Sbjct: 82 GSVLASHNNVIVVTINYRLALLGFLHIPGTQLRGNYGMLDQVQALKW 128
>SB_30325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 48.4 bits (110), Expect = 7e-06
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +2
Query: 266 WTDYLDATEEGPVCYQTDVLYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLPI 445
WT LDA VC QT G + +DE C+ N++ P LP+
Sbjct: 77 WTQTLDAVNP-KVCPQT----GEQV----VDENCLTLNVYKP--------SATRNSSLPV 119
Query: 446 XVFIHXXXXXXXXXXXDLYGPSILST-RNVVVITFNYRLNFFGFFSLDTPKVPGNNGLRD 622
VFIH D PS+L+T + ++V+T NYRL GF L + + N GL D
Sbjct: 120 LVFIHGGAFMRFSAHED--DPSLLATEQGIMVVTINYRLGILGF--LCSGDIKENLGLLD 175
Query: 623 MVTLLRW 643
+ L+W
Sbjct: 176 QIYALKW 182
>SB_28537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 353 MDEACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLYGPSILSTRNV 532
+ E C+Y NI P G P P+ V+I D G + L+ + V
Sbjct: 134 LSEDCLYLNIVEP-------GEPPISDKYPVMVYI-PGQDYSSGTSLDSLGHA-LALKEV 184
Query: 533 VVITFNYRLNFFGFFSLDT-PKVPGNNGLRDMVTLLRW 643
VV++ YRL FGF + + V GN GL D V L+W
Sbjct: 185 VVVSIQYRLGPFGFLTSEKGESVQGNQGLLDQVQALKW 222
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Frame = +2
Query: 440 PIXVFIHXXXXXXXXXXXDLYGPS--ILSTRNVVVITFNYRLNFFGFFSLDT------PK 595
P+ VFIH P+ +S VV I+FNYRLN FGF SLD
Sbjct: 1125 PVLVFIHGGELTYGSGHDSGIHPTPEFVSNLGVVGISFNYRLNAFGFLSLDALSDGSKSN 1184
Query: 596 VPGNNGLRDMVTLLRW 643
GN G D + L W
Sbjct: 1185 TSGNYGFMDQIMALSW 1200
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 117 NVVAQTESGWVXGRTRRAEASTLYASFRGVPYAKQPVGELXFK 245
+++ T+ G + G TR + A F+G+PYAK P+ ++ +K
Sbjct: 1034 SILIATDGGTIRG-TRNSNAWV----FKGIPYAKPPINDMRWK 1071
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 42.7 bits (96), Expect = 3e-04
Identities = 34/127 (26%), Positives = 50/127 (39%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGLP 442
PW + A G +C Q ++ M E C+ +++ P T LP
Sbjct: 67 PWKEVKQAILPGKICPQVEIPIAGQTTAI-MSEDCLILDVYAP---------NITNSSLP 116
Query: 443 IXVFIHXXXXXXXXXXXDLYGPSILSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNGLRD 622
+ VFIH G + NV+V+ YRL FG+ L K GN G+ D
Sbjct: 117 VMVFIHGGGFFAGGAR-SFDGSFQATIGNVIVVVIQYRLGVFGY--LYNGK-KGNFGMLD 172
Query: 623 MVTLLRW 643
+ L+W
Sbjct: 173 QIMALKW 179
>SB_40548| Best HMM Match : COesterase (HMM E-Value=3e-21)
Length = 424
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/64 (37%), Positives = 33/64 (51%)
Frame = +2
Query: 515 LSTRNVVVITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRWGEXGTPEPWEVNPXQRD 694
L+ +V+V+T NYRL GFF++ V GN GL D L G + W P + D
Sbjct: 138 LALHDVIVVTINYRLGVLGFFNIPDTDVKGNYGLFDQSLALPVGPAEYCKFW-WKPPKCD 196
Query: 695 LWRG 706
+RG
Sbjct: 197 NFRG 200
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 120 VVAQTESGWVXGRTRRAEASTLYASFRGVPYAKQPVGELXF 242
++ QT+SG V GR FR + YA+ P+G+L F
Sbjct: 51 LIVQTKSGAVEGRLEPTFHGLCTRQFRAIRYAEAPIGDLRF 91
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 509 SILSTRN-VVVITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
S+L+T +VV++ NYRL GF S + GN G+ D++ LRW
Sbjct: 155 SLLATEGEIVVVSINYRLGALGFLSTGEDGLNGNFGMLDVIEALRW 200
>SB_8608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/97 (27%), Positives = 40/97 (41%)
Frame = +2
Query: 353 MDEACIYANIHVPLNALPAAGXTPTKPGLPIXVFIHXXXXXXXXXXXDLYGPSILSTRNV 532
M E C+ +I+ P T +P+ VFIH G ++ S NV
Sbjct: 95 MSEDCLVLDIYAP---------NITNSSIPVMVFIHGGSYSFGGSRF-YDGSALASVGNV 144
Query: 533 VVITFNYRLNFFGFFSLDTPKVPGNNGLRDMVTLLRW 643
+V+ YRL FG+ GN G+ D + L+W
Sbjct: 145 IVVIAQYRLGMFGYLYNGN---KGNFGMLDQIMALKW 178
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 34.7 bits (76), Expect = 0.086
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 263 PWTDYLDATEEGPVCYQTDVLYGSLMKPHGMDEACIYANIHVPLNALPAAGXTPTKPGL 439
PWT +A G +C Q Y + K M E C+ N+ VP N AAG + G+
Sbjct: 69 PWTTTKNAFNFGKICPQAITPYTANFKTSEMSEDCLNLNVFVPNNT--AAGAMKSVMGI 125
>SB_56595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 117 NVVAQTESGWVXGRTRRAEASTLYASFRGVPYAKQPVGELXFKELQ 254
+VV E G + G F G+PYA+ PVGEL F + Q
Sbjct: 9 DVVITLEQGKIQGMREPVPGGYEVEIFLGIPYARAPVGELRFADPQ 54
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 622 VPKTIVSGDFRSIQ*EKSKEIQPVVKSDD-NNVS 524
+P TIV G+ R+IQ E SK I V ++DD NVS
Sbjct: 1028 IPITIVLGELRAIQAEISKAISEVTENDDKENVS 1061
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 174 LPPGEYGXTPSLTPSARPHCTTTAATLLGLSMPLLSPR 61
LPP TP+ TP+ P TT A+T+ +S+ + P+
Sbjct: 5606 LPPITTTTTPTTTPTTPPKSTTKASTMAPVSVSVDQPK 5643
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 706 APPKVTLXRINLPRLWRSXFTPTEQSHHVPKTIVSGDFRSIQ 581
+PPK + R W S Q+H +P+T VS +S Q
Sbjct: 46 SPPKAATPSPKITRSWSSPLFNRRQAHALPRTSVSNTGQSRQ 87
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 186 IKCLLPPGEYGXTPSLTPSARPHCTTTAAT 97
I +P G TPS TP A P TT+ T
Sbjct: 267 ISSAIPRGHLPTTPSTTPQATPPSTTSQTT 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,381,483
Number of Sequences: 59808
Number of extensions: 478212
Number of successful extensions: 1110
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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