Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0162
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.9  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 709 PMKWKRWLGTPLYSSSVKPPTIF 641
           P  + R   +PL SSS  PP +F
Sbjct: 169 PSGFNRASVSPLISSSSSPPGVF 191


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 552 IWTHHHHLPSNT 517
           +W HH H+P ++
Sbjct: 49  MWHHHSHMPPHS 60


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 552 IWTHHHHLPSNT 517
           +W HH H+P ++
Sbjct: 49  MWHHHSHMPPHS 60


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 396 LELHCYSLHY 367
           L+LH Y LHY
Sbjct: 87  LQLHIYDLHY 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,217
Number of Sequences: 336
Number of extensions: 3176
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)