Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0162
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical ...    29   4.6  
AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical ...    29   4.6  
AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine r...    28   8.1  

>Z47810-7|CAH10843.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 582 LFTEXLILISIWTHHHHLPSNTGIIVSLSTKASSSV 475
           +FT  ++L++ W  H  +PS   +I+ +  K + SV
Sbjct: 412 IFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSV 447


>Z47810-6|CAB76718.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 582 LFTEXLILISIWTHHHHLPSNTGIIVSLSTKASSSV 475
           +FT  ++L++ W  H  +PS   +I+ +  K + SV
Sbjct: 378 IFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSV 413


>AL031264-3|CAH04705.1|  538|Caenorhabditis elegans Hypothetical
           protein F45E10.2b protein.
          Length = 538

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 582 LFTEXLILISIWTHHHHLPSNTGIIVSLSTKASSSV 475
           +FT  ++L++ W  H  +PS   +I+ +  K + SV
Sbjct: 412 IFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSV 447


>AL031264-2|CAB76735.1|  504|Caenorhabditis elegans Hypothetical
           protein F45E10.2a protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 582 LFTEXLILISIWTHHHHLPSNTGIIVSLSTKASSSV 475
           +FT  ++L++ W  H  +PS   +I+ +  K + SV
Sbjct: 378 IFTAGMLLLASWLTHDLIPSQYAVIMLMVAKGAVSV 413


>AF016449-11|AAG23992.1|  353|Caenorhabditis elegans Serpentine
           receptor, class t protein7 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 213 CVCNRKINYLSFIKLVKNSIANNIVIRIISKIEDSLHYG 329
           C+C   I YLSF + ++NS+   I+ + I +I   LH G
Sbjct: 284 CMC---IAYLSFNRTIRNSVVKMIIPKAI-RIRYGLHVG 318


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,140,914
Number of Sequences: 27780
Number of extensions: 290580
Number of successful extensions: 555
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)