Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0162
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   1.00 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    25   1.00 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    24   1.3  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    24   1.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   7.0  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   9.3  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 CKLSSILLIIRMTMLLAIEFLTSLIN 245
           CKL+ ILL +R  + L  E + S IN
Sbjct: 246 CKLNDILLTVRPHLELTFENILSHIN 271


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 322 CKLSSILLIIRMTMLLAIEFLTSLIN 245
           CKL+ ILL +R  + L  E + S IN
Sbjct: 246 CKLNDILLTVRPHLELTFENILSHIN 271


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 437 TAYQNLRLRAISLTEDEAFVESETIIPVL 523
           T Y    L A SL +DEA V+ + ++ +L
Sbjct: 71  TCYMYCLLEAFSLVDDEANVDEDIMLGLL 99


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 437 TAYQNLRLRAISLTEDEAFVESETIIPVL 523
           T Y    L A SL +DEA V+ + ++ +L
Sbjct: 71  TCYMYCLLEAFSLVDDEANVDEDIMLGLL 99


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 247 LLSLSKIL*PTTLSFGLLVK 306
           LL +SKIL PT+L   L+ K
Sbjct: 279 LLLVSKILPPTSLVLPLIAK 298


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 510 IVSLSTKASSSVKEIALNRRFWYAVHFYFPN 418
           I+ L   + S  +E   N   W A+ F FPN
Sbjct: 9   ILFLLAISDSQAQEKLKNIYSWKALEFAFPN 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,515
Number of Sequences: 438
Number of extensions: 3912
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)