Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0155
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    30   2.1  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    29   3.7  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z66513-3|CAA91331.1|  186|Caenorhabditis elegans Hypothetical pr...    28   8.7  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    28   8.7  

>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -2

Query: 661 SRCSVRIGTAKSTALSNPLV*RVFSKECPEKLPQG*LACGSPSVHSDVEFLSFDVGSSYH 482
           SR  V     KSTA+    V   F+++ P ++P G ++C SP   S +   S+   ++ H
Sbjct: 642 SRRRVSTSVNKSTAVPGQPV--FFTRDSPSRVPHGVISCSSPRSSSKLNRSSYPSRNAPH 699


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -2

Query: 661 SRCSVRIGTAKSTALSNPLV*RVFSKECPEKLPQG*LACGSPSVHSDVEFLSFDVGSSYH 482
           SR  V     KSTA+    V   F+++ P ++P G ++C SP   S +   S+   ++ H
Sbjct: 642 SRRRVSTSVNKSTAVPGQPV--FFTRDSPSRVPHGVISCSSPRSSSKLNRSSYPSRNAPH 699


>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRE 192
           RPSG WC     GI   + +AE + A  G  +  ++ R+
Sbjct: 93  RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131



 Score = 29.1 bits (62), Expect = 3.7
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -1

Query: 347 REEPQFRTFGSCTRPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVE-PRES 189
           R EP +R F    RPSG WC     G    ++ AEA+    G  +  ++ P+E+
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTGFHAAKADAEAACQAVGATLSGLQNPQEA 305


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -1

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 144
           RPSG WC     G    ++ AE S    G  +  ++ R      Q    ++++ S
Sbjct: 49  RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
            protein Y18D10A.1 protein.
          Length = 1634

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +1

Query: 184  PPDSRGSTVSISLPDSARLASALERSGIIPRMVASHHRPLGR 309
            PP S  ST   S PDSA   S++++ G    + A   RP G+
Sbjct: 1149 PPSSSSSTEPPSAPDSASTTSSMKKGGGAIMIEAVPCRPGGK 1190


>Z66513-3|CAA91331.1|  186|Caenorhabditis elegans Hypothetical
           protein F54D5.4 protein.
          Length = 186

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 154 TRL-VKSHCLEPPDSRGSTVSISLPD-SARLASALERSGIIPRMVASHHRPLGRVHEPNV 327
           TRL  K +C E   + G+ +     D S    + +ERS  I  ++A H     R  +PN 
Sbjct: 44  TRLNTKYYCFEGCLNTGTALQNCKVDMSGNNGTRIERSREIKEVIALHQLARQRDEDPNA 103

Query: 328 RNC 336
           ++C
Sbjct: 104 KSC 106


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 341 EPQFRTFGSCTRPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVE 201
           EP ++ F    RPSG WC     G   +++ AE S    G  +  ++
Sbjct: 41  EPGWKFFN---RPSGGWCMRVFAGFNAKKADAEKSCQAVGSTLSGIQ 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,946,345
Number of Sequences: 27780
Number of extensions: 376274
Number of successful extensions: 930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)