Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0154
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 55 3e-07
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 52 1e-06
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 52 1e-06
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 52 1e-06
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 50 6e-06
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 50 6e-06
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 50 6e-06
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 50 6e-06
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 50 6e-06
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 50 6e-06
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 50 6e-06
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 48 3e-05
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 47 7e-05
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 43 9e-04
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 43 9e-04
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 43 9e-04
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 37 0.078
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 37 0.078
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 37 0.078
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 37 0.078
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 37 0.078
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 36 0.14
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 34 0.55
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 34 0.55
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 34 0.55
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 34 0.55
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 34 0.55
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 34 0.55
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 34 0.55
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 34 0.55
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 34 0.55
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 33 0.73
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 33 0.73
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 33 0.73
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 33 0.73
BC000819-1|AAH00819.1| 290|Homo sapiens CCBL2 protein protein. 31 5.1
AY028624-1|AAK26163.1| 454|Homo sapiens kynurenine aminotransfe... 31 5.1
AL445991-7|CAI41345.1| 420|Homo sapiens cysteine conjugate-beta... 31 5.1
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 30 6.8
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 30 6.8
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.9
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.9
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.9
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 30 8.9
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 30 8.9
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 30 8.9
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 30 8.9
BC052289-1|AAH52289.1| 421|Homo sapiens CPA4 protein protein. 30 8.9
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 30 8.9
AY358699-1|AAQ89062.1| 421|Homo sapiens CPA4 protein. 30 8.9
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 30 8.9
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 30 8.9
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 30 8.9
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 30 8.9
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 30 8.9
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 30 8.9
AF095719-1|AAF23230.1| 421|Homo sapiens carboxypeptidase A3 pro... 30 8.9
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 30 8.9
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 30 8.9
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 54.8 bits (126), Expect = 3e-07
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 47 CYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 103
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 72 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 129
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 130 VK-CYRCGETGHVA 142
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 169
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/82 (35%), Positives = 38/82 (46%)
Frame = -1
Query: 546 EEDARKVACGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAG 367
+ED CG G + + C +R CY C K GH A +CD D + C C E G
Sbjct: 63 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 120
Query: 366 HMAGDCVNEQFCPLCNKKGHTA 301
H+ DC + C C + GH A
Sbjct: 121 HIQKDCTKVK-CYRCGETGHVA 141
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 47 CYRCGESGHLAKDCDLQE-DEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 102
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 121 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 168
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/82 (35%), Positives = 38/82 (46%)
Frame = -1
Query: 546 EEDARKVACGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAG 367
+ED CG G + + C +R CY C K GH A +CD D + C C E G
Sbjct: 70 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 366 HMAGDCVNEQFCPLCNKKGHTA 301
H+ DC + C C + GH A
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVA 148
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE-DEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 109
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 128 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 175
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 52.4 bits (120), Expect = 1e-06
Identities = 29/82 (35%), Positives = 38/82 (46%)
Frame = -1
Query: 546 EEDARKVACGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAG 367
+ED CG G + + C +R CY C K GH A +CD D + C C E G
Sbjct: 70 QEDEACYNCGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFG 127
Query: 366 HMAGDCVNEQFCPLCNKKGHTA 301
H+ DC + C C + GH A
Sbjct: 128 HIQKDCTKVK-CYRCGETGHVA 148
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE-DEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 109
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 128 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 175
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 77 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 134
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 135 VK-CYRCGETGHVA 147
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 127 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 174
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 77 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 134
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 135 VK-CYRCGETGHVA 147
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 127 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 174
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 77 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 134
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 135 VK-CYRCGETGHVA 147
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 127 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 174
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 47 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 101
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 70 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 127
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 128 VK-CYRCGETGHVA 140
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 120 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 167
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 47 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 101
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 70 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 127
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 128 VK-CYRCGETGHVA 140
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 120 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 167
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 108
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 77 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 134
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 135 VK-CYRCGETGHVA 147
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 127 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 174
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 50.4 bits (115), Expect = 6e-06
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC-----VNEQFCPLCNKKGHTA 301
CYRC + GH A +CD ++ AC C GH+A DC EQ C C K GH A
Sbjct: 44 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLA 98
Score = 50.4 bits (115), Expect = 6e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C K GH A +CD D + C C E GH+ DC
Sbjct: 67 CGRGGHIAKD-CKEPKREREQCCYNCGKPGHLARDCDHADEQK-CYSCGEFGHIQKDCTK 124
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 125 VK-CYRCGETGHVA 137
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 117 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 164
Score = 39.1 bits (87), Expect = 0.015
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 17/69 (24%)
Frame = -1
Query: 456 CYRCWKYGHKADNC-DGEDRSRA---------------CRRCSEAGHMAGDC-VNEQFCP 328
C++C + GH A C G R R C RC E+GH+A DC + E C
Sbjct: 6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQEDACY 65
Query: 327 LCNKKGHTA 301
C + GH A
Sbjct: 66 NCGRGGHIA 74
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 48.0 bits (109), Expect = 3e-05
Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRA--CRRCSEAGHMAGDC 349
CG GR N C + I CY C + GH A +C R R C C GH+A DC
Sbjct: 50 CGESGRNAKN-CVLLGNI----CYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDC 104
Query: 348 --VNEQFCPLCNKKGH 307
EQ C C K GH
Sbjct: 105 DRQKEQKCYSCGKLGH 120
Score = 48.0 bits (109), Expect = 3e-05
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = -1
Query: 522 CGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN 343
CG G + + C +R CY C + GH A +CD + + C C + GH+ DC
Sbjct: 70 CGRSGHIAKD-CKDPKRERRQHCYTCGRLGHLARDCD-RQKEQKCYSCGKLGHIQKDCAQ 127
Query: 342 EQFCPLCNKKGHTA 301
+ C C + GH A
Sbjct: 128 VK-CYRCGEIGHVA 140
Score = 38.7 bits (86), Expect = 0.019
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -1
Query: 549 DEEDARKVACGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEA 370
D + R+ C GR+G ++ +R + +CY C K GH +C C RC E
Sbjct: 82 DPKRERRQHCYTCGRLG-HLARDCDRQKEQKCYSCGKLGHIQKDC----AQVKCYRCGEI 136
Query: 369 GHMAGDC 349
GH+A +C
Sbjct: 137 GHVAINC 143
Score = 38.3 bits (85), Expect = 0.026
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVN-----EQFCPLCNKKGHTA 301
CY C + G A NC C C +GH+A DC + Q C C + GH A
Sbjct: 47 CYCCGESGRNAKNC--VLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLA 101
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = -1
Query: 435 GH-KADNCDGEDRSRACRRCSEAGHMAGDCV-NEQFCPLCNKKGHTA 301
GH + C S C C E+G A +CV C C + GH A
Sbjct: 31 GHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNICYNCGRSGHIA 77
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE 340
HI + ++CYRC + GH A NC C RC E+GH+A +C E
Sbjct: 4 HIQKDCTKVKCYRCGETGHVAINCSKTSEVN-CYRCGESGHLARECTIE 51
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 43.2 bits (97), Expect = 9e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
C++C H + +C +DR C RC E GH++ C C LC K+GH
Sbjct: 171 CFKCGSRTHMSGSCT-QDR---CFRCGEEGHLSPYCRKGIVCNLCGKRGH 216
Score = 30.3 bits (65), Expect = 6.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 396 RACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
+ C +C HM+G C ++ C C ++GH
Sbjct: 169 KTCFKCGSRTHMSGSCTQDR-CFRCGEEGH 197
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RC+RC + GH + C + C C + GH C
Sbjct: 188 RCFRCGEEGHLSPYC---RKGIVCNLCGKRGHAFAQC 221
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 43.2 bits (97), Expect = 9e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
C++C H + +C +DR C RC E GH++ C C LC K+GH
Sbjct: 335 CFKCGSRTHMSGSCT-QDR---CFRCGEEGHLSPYCRKGIVCNLCGKRGH 380
Score = 30.3 bits (65), Expect = 6.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 396 RACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
+ C +C HM+G C ++ C C ++GH
Sbjct: 333 KTCFKCGSRTHMSGSCTQDR-CFRCGEEGH 361
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RC+RC + GH + C + C C + GH C
Sbjct: 352 RCFRCGEEGHLSPYC---RKGIVCNLCGKRGHAFAQC 385
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 43.2 bits (97), Expect = 9e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
C++C H + +C +DR C RC E GH++ C C LC K+GH
Sbjct: 336 CFKCGSRTHMSGSCT-QDR---CFRCGEEGHLSPYCRKGIVCNLCGKRGH 381
Score = 30.3 bits (65), Expect = 6.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 396 RACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
+ C +C HM+G C ++ C C ++GH
Sbjct: 334 KTCFKCGSRTHMSGSCTQDR-CFRCGEEGH 362
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RC+RC + GH + C + C C + GH C
Sbjct: 353 RCFRCGEEGHLSPYC---RKGIVCNLCGKRGHAFAQC 386
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 36.7 bits (81), Expect = 0.078
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKGHT 304
C C K GH + NC + R C CS GH+ C ++CP+ H+
Sbjct: 242 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHS 294
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 36.7 bits (81), Expect = 0.078
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKGHT 304
C C K GH + NC + R C CS GH+ C ++CP+ H+
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHS 295
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 36.7 bits (81), Expect = 0.078
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKGHT 304
C C K GH + NC + R C CS GH+ C ++CP+ H+
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHS 295
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 36.7 bits (81), Expect = 0.078
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKGHT 304
C C K GH + NC + R C CS GH+ C ++CP+ H+
Sbjct: 91 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHS 143
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 36.7 bits (81), Expect = 0.078
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKGHT 304
C C K GH + NC + R C CS GH+ C ++CP+ H+
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHS 295
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 35.9 bits (79), Expect = 0.14
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPL 325
C C K GH + NC + R C CS GH+ C ++CP+
Sbjct: 243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPAPLCEYCPV 288
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 184
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 184
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 105 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 161
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 105 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 161
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 105 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 161
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 105 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 161
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 105 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 161
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 184
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFC-PLCNKKGHTAGTS 292
RCY C H A C + + C C HM +C ++ P + +G S
Sbjct: 128 RCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQGRQEAES 184
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 33.5 bits (73), Expect = 0.73
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RCY C H A C + + C C HM C
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 33.5 bits (73), Expect = 0.73
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RCY C H A C + + C C HM C
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 33.5 bits (73), Expect = 0.73
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RCY C H A C + + C C HM C
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 33.5 bits (73), Expect = 0.73
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
RCY C H A C + + C C HM C
Sbjct: 138 RCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>BC000819-1|AAH00819.1| 290|Homo sapiens CCBL2 protein protein.
Length = 290
Score = 30.7 bits (66), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 81 CHTPIQQLLPIFYWVQIASL-DPRSYCSQLP---EVGRARL 191
C TP+Q+ L +W+ I + DP Y + LP EV R R+
Sbjct: 149 CATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRM 189
>AY028624-1|AAK26163.1| 454|Homo sapiens kynurenine
aminotransferase III protein.
Length = 454
Score = 30.7 bits (66), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 81 CHTPIQQLLPIFYWVQIASL-DPRSYCSQLP---EVGRARL 191
C TP+Q+ L +W+ I + DP Y + LP EV R R+
Sbjct: 313 CATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRM 353
>AL445991-7|CAI41345.1| 420|Homo sapiens cysteine conjugate-beta
lyase 2 protein.
Length = 420
Score = 30.7 bits (66), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 81 CHTPIQQLLPIFYWVQIASL-DPRSYCSQLP---EVGRARL 191
C TP+Q+ L +W+ I + DP Y + LP EV R R+
Sbjct: 279 CATPLQEALAQAFWIDIKRMDDPECYFNSLPKELEVKRDRM 319
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 30.3 bits (65), Expect = 6.8
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Frame = -1
Query: 456 CYRCWKYGHKADNCD-------GEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
CYRC H+ C GE C C E GH++ C + N KG A
Sbjct: 157 CYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD-------NPKGLYAD 209
Query: 297 TSGCSL 280
GC L
Sbjct: 210 GGGCKL 215
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 30.3 bits (65), Expect = 6.8
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Frame = -1
Query: 456 CYRCWKYGHKADNCD-------GEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
CYRC H+ C GE C C E GH++ C + N KG A
Sbjct: 157 CYRCGSTEHEITKCKAKVDPALGEFPFAKCFVCGEMGHLSRSCPD-------NPKGLYAD 209
Query: 297 TSGCSL 280
GC L
Sbjct: 210 GGGCKL 215
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 313 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 360
>BC052289-1|AAH52289.1| 421|Homo sapiens CPA4 protein protein.
Length = 421
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 686 WTSSLEMEEVREDXKSTNLIKKVDSLEIRSLRPDGRWKTRRQR*SWMK---RMPGRLLAG 516
WT+ + + + D T++++K+D + PDG T+ Q W K R PG G
Sbjct: 193 WTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIG 252
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>AY358699-1|AAQ89062.1| 421|Homo sapiens CPA4 protein.
Length = 421
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 686 WTSSLEMEEVREDXKSTNLIKKVDSLEIRSLRPDGRWKTRRQR*SWMK---RMPGRLLAG 516
WT+ + + + D T++++K+D + PDG T+ Q W K R PG G
Sbjct: 193 WTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIG 252
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = -1
Query: 486 HIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-----CVNEQFCPLC 322
+I+ + + C +C K + ++C G + CR C A + C++ C C
Sbjct: 49 YIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLS---CSKC 105
Query: 321 NKKGHTAGTSGCSLFREAL 265
K+ S C++ R+ +
Sbjct: 106 RKEMGQVEISSCTVDRDTV 124
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Frame = -1
Query: 456 CYRCWKYGHKADNCD----GEDRSRACRRCSEAGHMAGDCVNEQFCP 328
CY+C K GH NC GE AC C + + +C Q P
Sbjct: 437 CYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPESQKGP 483
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF095719-1|AAF23230.1| 421|Homo sapiens carboxypeptidase A3
protein.
Length = 421
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 686 WTSSLEMEEVREDXKSTNLIKKVDSLEIRSLRPDGRWKTRRQR*SWMK---RMPGRLLAG 516
WT+ + + + D T++++K+D + PDG T+ Q W K R PG G
Sbjct: 193 WTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIG 252
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA 301
+CY C + GH NC ++ + + G D CP C K H A
Sbjct: 545 KCYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPD-----LCPRCKKGKHWA 592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,798,896
Number of Sequences: 237096
Number of extensions: 2309745
Number of successful extensions: 5690
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 5226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5573
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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