Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0154
(690 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 72 6e-13
AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p pro... 60 2e-09
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 49 5e-06
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 48 2e-05
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 48 2e-05
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 48 2e-05
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.010
AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p pro... 38 0.013
AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding ... 38 0.013
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 38 0.013
AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA... 38 0.013
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 38 0.017
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 37 0.022
U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein. 36 0.052
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 35 0.12
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 35 0.12
U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein. 34 0.21
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 34 0.21
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 34 0.21
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 34 0.21
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 33 0.28
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 33 0.28
AY071205-1|AAL48827.1| 184|Drosophila melanogaster RE24565p pro... 33 0.28
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 33 0.28
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 33 0.28
AE013599-1925|AAF58228.3| 437|Drosophila melanogaster CG12863-P... 33 0.28
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 32 0.84
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 31 1.1
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 31 1.5
BT012323-1|AAS77448.1| 323|Drosophila melanogaster AT25213p pro... 31 1.9
BT001366-1|AAN71121.1| 323|Drosophila melanogaster AT30609p pro... 31 1.9
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro... 31 1.9
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA... 31 1.9
AE013599-1255|AAF58679.2| 323|Drosophila melanogaster CG18335-P... 31 1.9
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 30 2.6
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 29 6.0
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 29 6.0
BT016021-1|AAV36906.1| 662|Drosophila melanogaster RE15373p pro... 29 6.0
BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p pro... 29 6.0
AE014298-2002|AAN09579.1| 662|Drosophila melanogaster CG11584-P... 29 6.0
AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA ... 29 6.0
Y15513-1|CAA75667.1| 328|Drosophila melanogaster Prodos protein... 29 7.9
AY071604-1|AAL49226.1| 328|Drosophila melanogaster RE65343p pro... 29 7.9
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 29 7.9
AE014298-2666|AAF48800.1| 328|Drosophila melanogaster CG7128-PA... 29 7.9
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 72.1 bits (169), Expect = 6e-13
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = -1
Query: 570 QTATVILDEEDARKVACGW*GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRA 391
Q A+V++ DA V VG + C I + + +RC+RC ++GH+A C DRS
Sbjct: 371 QIASVLMCANDAIAVINRGVVTVGWSRCRIAQDVRPIRCFRCLEFGHRAPYCKSVDRSDC 430
Query: 390 CRRCSEAGHMAGDCVNEQFCPLCNK---KGHTAGTSGCSLFR 274
C RC E GH A CV C +C+ K H G C ++
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSDVDKNHATGGFACPTYK 472
>AY118707-1|AAM50567.1| 186|Drosophila melanogaster AT22983p
protein.
Length = 186
Score = 60.5 bits (140), Expect = 2e-09
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = -1
Query: 510 GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGE-DRSRACRRCSEAGHMAGDCVNEQF 334
GRVG + C I E RC+RC + GH A +C DRS+ C RC AGH A +C E
Sbjct: 82 GRVGWSQCLIKELEPRQRCFRCLEEGHIAAHCRSTVDRSQCCFRCGTAGHKA-ECPKEAK 140
Query: 333 CPLCNKKGHTA 301
C LC +G+ A
Sbjct: 141 CFLCASRGNQA 151
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 49.2 bits (112), Expect = 5e-06
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = -1
Query: 600 ITETRWAVENQTATVILDEEDARKVACGW*GRVGLN--ICHIYERIELLRCYRCWKYGHK 427
+T+ A + T V L+ +D R +A GRV + ++ C+RC + HK
Sbjct: 350 VTKAWSATDGATVNVTLEVDD-RAMAKLDVGRVYIKWFSFRCRSQVRTYACHRCVGFDHK 408
Query: 426 ADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
C + CR+C + GH A C N C C +G +G
Sbjct: 409 VSEC--RQKESVCRQCGQQGHTAAKCQNPVDCRNCRHRGQPSG 449
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPL 325
C +C + GH A C CR C G +G + CP+
Sbjct: 419 CRQCGQQGHTAAKCQNPVD---CRNCRHRGQPSGHYMLSNACPI 459
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC--VNEQFCPLCNKKGH 307
+CY+C ++GH A C E + C RC+ GH++ DC + C CNK GH
Sbjct: 56 KCYKCNQFGHFARACPEE--AERCYRCNGIGHISKDCTQADNPTCYRCNKTGH 106
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC---VNEQ-----FCPLCNKK 313
E RCYRC GH + +C D + C RC++ GH +C VNE+ C CN+
Sbjct: 73 EAERCYRCNGIGHISKDCTQAD-NPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRT 131
Query: 312 GH 307
GH
Sbjct: 132 GH 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSR-----ACRRCSEAGHMAGDC-VNEQFCPLCNKKGH 307
CYRC K GH NC R +C +C+ GH++ +C + C C K GH
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGH 153
Score = 37.1 bits (82), Expect = 0.022
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
CY+C + GH + NC + S+ C C ++GH+ +C
Sbjct: 125 CYKCNRTGHISKNC--PETSKTCYGCGKSGHLRREC 158
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC--VNEQFCPLCNKKGH 307
+CY+C ++GH A C E + C RC+ GH++ DC + C CNK GH
Sbjct: 56 KCYKCNQFGHFARACPEE--AERCYRCNGIGHISKDCTQADNPTCYRCNKTGH 106
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC---VNEQ-----FCPLCNKK 313
E RCYRC GH + +C D + C RC++ GH +C VNE+ C CN+
Sbjct: 73 EAERCYRCNGIGHISKDCTQAD-NPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRT 131
Query: 312 GH 307
GH
Sbjct: 132 GH 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSR-----ACRRCSEAGHMAGDC-VNEQFCPLCNKKGH 307
CYRC K GH NC R +C +C+ GH++ +C + C C K GH
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGH 153
Score = 37.1 bits (82), Expect = 0.022
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
CY+C + GH + NC + S+ C C ++GH+ +C
Sbjct: 125 CYKCNRTGHISKNC--PETSKTCYGCGKSGHLRREC 158
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC--VNEQFCPLCNKKGH 307
+CY+C ++GH A C E + C RC+ GH++ DC + C CNK GH
Sbjct: 56 KCYKCNQFGHFARACPEE--AERCYRCNGIGHISKDCTQADNPTCYRCNKTGH 106
Score = 43.6 bits (98), Expect = 3e-04
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC---VNEQ-----FCPLCNKK 313
E RCYRC GH + +C D + C RC++ GH +C VNE+ C CN+
Sbjct: 73 EAERCYRCNGIGHISKDCTQAD-NPTCYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRT 131
Query: 312 GH 307
GH
Sbjct: 132 GH 133
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSR-----ACRRCSEAGHMAGDC-VNEQFCPLCNKKGH 307
CYRC K GH NC R +C +C+ GH++ +C + C C K GH
Sbjct: 98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGH 153
Score = 37.1 bits (82), Expect = 0.022
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 456 CYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDC 349
CY+C + GH + NC + S+ C C ++GH+ +C
Sbjct: 125 CYKCNRTGHISKNC--PETSKTCYGCGKSGHLRREC 158
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 38.3 bits (85), Expect = 0.010
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1
Query: 219 VLQINIDRGKAAHDLLLATASSMSADLVMLSEPNRKLAKAAGWECDTRGDAALVLLNKTL 40
++Q+N++ AA +LL TA AD+V+LSEP +G D G AA+ ++ L
Sbjct: 8 IIQLNVNHCAAAQNLLTQTAKERHADVVLLSEPYLPGVGNSGVLLDETGKAAIKCTSRLL 67
>AY118360-1|AAM48389.1| 195|Drosophila melanogaster RE05342p
protein.
Length = 195
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -1
Query: 483 IYERIELLRCYRCWKYG-HKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
I R +RCY C ++ H A C + + C RC H+ DC ++ +
Sbjct: 118 INRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKS 177
Query: 306 TAGTSGCSLFREALETAS 253
+ S S +E E A+
Sbjct: 178 ISNNSSSSAAQEKSEEAT 195
>AF521096-1|AAM77748.1| 195|Drosophila melanogaster RNA-binding
protein LIN-28 protein.
Length = 195
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -1
Query: 483 IYERIELLRCYRCWKYG-HKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
I R +RCY C ++ H A C + + C RC H+ DC ++ +
Sbjct: 118 INRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKS 177
Query: 306 TAGTSGCSLFREALETAS 253
+ S S +E E A+
Sbjct: 178 ISNNSSSSAAQEKSEEAT 195
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 37.9 bits (84), Expect = 0.013
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -1
Query: 477 ERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNE--QFCPLCNKKG-H 307
+R +++C+RC + GH A C ++ C +C+ H A DC + C N G H
Sbjct: 280 KRNAIVQCHRCQQIGHTAKYC---RKAHICVKCA-GEHPAKDCTRPRIELCTCYNCGGQH 335
Query: 306 TAGTSGCSLFREALE 262
A GCS + L+
Sbjct: 336 PANYKGCSKLQAFLQ 350
>AE014296-983|AAF50758.2| 195|Drosophila melanogaster CG17334-PA
protein.
Length = 195
Score = 37.9 bits (84), Expect = 0.013
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -1
Query: 483 IYERIELLRCYRCWKYG-HKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGH 307
I R +RCY C ++ H A C + + C RC H+ DC ++ +
Sbjct: 118 INRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKS 177
Query: 306 TAGTSGCSLFREALETAS 253
+ S S +E E A+
Sbjct: 178 ISNNSSSSAAQEKSEEAT 195
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 37.5 bits (83), Expect = 0.017
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -1
Query: 507 RVGLNICHIYERIEL-LRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHM--AGDCVNEQ 337
R+G + + I L LRC +C ++GH C + C CSE H C NE+
Sbjct: 170 RIGYETVRVRDYIPLPLRCKKCLRFGHPTPICKSVE---TCINCSETKHTNDGEKCTNEK 226
Query: 336 FCPLC 322
C C
Sbjct: 227 NCLNC 231
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 37.1 bits (82), Expect = 0.022
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRS-RACRRCSEAGHMAGDC 349
+ +RC C GHKAD C R +C C + GH+ C
Sbjct: 352 DAIRCANCNSRGHKADICKKPKREPGSCYACGQLGHLVAQC 392
>U23420-1|AAB03640.1| 1607|Drosophila melanogaster unknown protein.
Length = 1607
Score = 35.9 bits (79), Expect = 0.052
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 396 RACRRCSEAGHMAGDCVNEQFCPLCNKKGHTA--GTSGCSLFREALETASED 247
+ C C HM G+C + C +C +K HT G+S ++TAS D
Sbjct: 213 KLCFNCLSPAHMVGNCTSRHTCRICRRKHHTLVHGSSQPIQNGNNIDTASVD 264
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 34.7 bits (76), Expect = 0.12
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQ----FCPLCNKKGHTAGTS 292
+C+RC +GH + C + C +C + H + C + C CN H +
Sbjct: 794 QCHRCQCFGHTKNYCRNPFK---CMKCGQL-HASVSCTKPKNLPATCANCN-GSHVSSYK 848
Query: 291 GCSLFREALETAS 253
GC +F+EA + S
Sbjct: 849 GCPVFQEAKQRLS 861
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 34.7 bits (76), Expect = 0.12
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAG 298
E ++CYRC + H ++C R C +C+ GH++ C + P C N G H +
Sbjct: 659 EPVQCYRCQGFRHSKNSC---MRPPRCMKCA-GGHLSSCCTKPRTTPATCVNCSGEHISA 714
Query: 297 TSGCSLFR 274
GC ++
Sbjct: 715 YKGCPAYK 722
>U11691-1|AAA19905.1| 796|Drosophila melanogaster E239.9-1 protein.
Length = 796
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 465 LLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-CVNEQFCPLCNKKGHT 304
L++C++ +K + A+ D ++ C RC H G C++EQ C C K HT
Sbjct: 362 LIQCHK-FKIMNPAERSDWVRKNGICLRCLR--HPFGKKCISEQLCSTCRKPHHT 413
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 33.9 bits (74), Expect = 0.21
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = -1
Query: 510 GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD--CVNEQ 337
GR + + R ELL+C RC +GH + C + C +CS HM G C+++
Sbjct: 353 GRYRVTVERATRRKELLQCQRCQIFGHSKNYC---AQDPICGKCS-GPHMTGFALCISD- 407
Query: 336 FCPLCNKKG-HTAGTSGCSLFRE 271
C N G H + C + E
Sbjct: 408 VCLCINCGGDHVSTDKSCPVRAE 430
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 33.9 bits (74), Expect = 0.21
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = -1
Query: 510 GRVGLNICHIYERIELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD--CVNEQ 337
GR + + R ELL+C RC +GH + C + C +CS HM G C+++
Sbjct: 387 GRYRVTVERATRRKELLQCQRCQIFGHSKNYC---AQDPICGKCS-GPHMTGFALCISD- 441
Query: 336 FCPLCNKKG-HTAGTSGCSLFRE 271
C N G H + C + E
Sbjct: 442 VCLCINCGGDHVSTDKSCPVRAE 464
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 465 LLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGD-CVNEQFCPLCNKKGHT 304
L++C++ +K + A+ D ++ C RC H G C++EQ C C K HT
Sbjct: 441 LIQCHK-FKIMNPAERSDWVRKNGICLRCLR--HPFGKKCISEQLCSTCRKPHHT 492
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQ----FCPLCNKKGHTAGTS 292
+C+RC +GH + C + C +C + H C + C CN H +
Sbjct: 794 QCHRCQCFGHTKNYCRNPFK---CMKCGQL-HATVSCTKPKNLPATCANCN-GSHVSSYK 848
Query: 291 GCSLFREALETAS 253
GC F+EA + S
Sbjct: 849 GCPAFQEAKQRLS 861
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQ----FCPLCNKKGHTAGTS 292
+C+RC +GH + C + C +C + H C + C CN H +
Sbjct: 717 QCHRCQCFGHTKNYCRNPFK---CMKCGQL-HATVSCTKPKNLPATCANCN-GSHVSSYK 771
Query: 291 GCSLFREALETAS 253
GC F+EA + S
Sbjct: 772 GCPAFQEAKQRLS 784
>AY071205-1|AAL48827.1| 184|Drosophila melanogaster RE24565p
protein.
Length = 184
Score = 33.5 bits (73), Expect = 0.28
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Frame = -1
Query: 489 CHIYERIELLRCYRCWKY----GHKADNCDGED--------RSRACRRCSEA-GHMAGDC 349
C Y E L C RC K G +C+ D CRRC++ GH
Sbjct: 58 CDCYTAKENLHCNRCGKCPSVNGQTYKHCESCDACVKPNYVHCSDCRRCTQKEGHNCSFY 117
Query: 348 VNEQFCPLCNKKGHTAGTSGCSLFRE 271
+Q C +C +KGH + C FR+
Sbjct: 118 QTKQHCWMCGQKGHI--ETKCPNFRK 141
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQ----FCPLCNKKGHTAGTS 292
+C+RC +GH + C + C +C + H C + C CN H +
Sbjct: 4 QCHRCQCFGHTKNYCRNPFK---CMKCGQL-HATVSCTKPKNLPATCANCN-GSHVSSYK 58
Query: 291 GCSLFREALETAS 253
GC F+EA + S
Sbjct: 59 GCPAFQEAKQRLS 71
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 33.5 bits (73), Expect = 0.28
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQ----FCPLCNKKGHTAGTS 292
+C+RC +GH + C + C +C + H C + C CN H +
Sbjct: 717 QCHRCQCFGHTKNYCRNPFK---CMKCGQL-HATVSCTKPKNLPATCANCN-GSHVSSYK 771
Query: 291 GCSLFREALETAS 253
GC F+EA + S
Sbjct: 772 GCPAFQEAKQRLS 784
>AE013599-1925|AAF58228.3| 437|Drosophila melanogaster CG12863-PA
protein.
Length = 437
Score = 33.5 bits (73), Expect = 0.28
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Frame = -1
Query: 489 CHIYERIELLRCYRCWKY----GHKADNCDGED--------RSRACRRCSEA-GHMAGDC 349
C Y E L C RC K G +C+ D CRRC++ GH
Sbjct: 311 CDCYTAKENLHCNRCGKCPSVNGQTYKHCESCDACVKPNYVHCSDCRRCTQKEGHNCSFY 370
Query: 348 VNEQFCPLCNKKGHTAGTSGCSLFRE 271
+Q C +C +KGH + C FR+
Sbjct: 371 QTKQHCWMCGQKGHI--ETKCPNFRK 394
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 31.9 bits (69), Expect = 0.84
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAG 298
E ++CYRC + H ++C R C +C+ H++ C + P C N G H +
Sbjct: 622 EPVQCYRCQGFRHAKNSC---MRPPRCMKCA-GEHLSSCCTKPRTTPATCVNCSGQHISA 677
Query: 297 TSGCSLFR-EALETASED*PIKKM 229
GC ++ E + A+ + I K+
Sbjct: 678 YKGCPAYKAEKQKLAANNVDINKI 701
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 31.5 bits (68), Expect = 1.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAG 298
E ++CYRC + H ++C R C +C+ H++ C + P C N G H +
Sbjct: 652 EPVQCYRCQGFRHAKNSCMKPPR---CMKCA-GDHLSSCCTKPRSTPATCVNCSGEHISA 707
Query: 297 TSGCSLFR 274
GC ++
Sbjct: 708 YKGCPTYK 715
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -1
Query: 462 LRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAGTSGCS 283
+RC C GH + +C AC C+ A H+ C FC C + H A + C
Sbjct: 202 MRCKSCQLLGHTSKHCKNPP---ACVSCNLAPHLPVPC-TRIFCANCTGQ-HPASSPECP 256
Query: 282 LFR 274
++
Sbjct: 257 QYQ 259
>BT012323-1|AAS77448.1| 323|Drosophila melanogaster AT25213p
protein.
Length = 323
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = -1
Query: 567 TATVILDEEDARK-VACGW*GRVGLNICHIYERIELLR----C-YRCWKYGHKADN-CDG 409
T+ L++EDA K + G+ G + +++ E ++L C + + Y K D C G
Sbjct: 190 TSPHFLEDEDADKFIINGYSGHIPMSVTRFGESNKVLTNRALCSFSDYMYKRKRDTWCCG 249
Query: 408 EDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
+D SR C GH +E + N GH G
Sbjct: 250 QDLSRPSITCPPVGHFV--VYHEDSGMVPNYAGHVPG 284
>BT001366-1|AAN71121.1| 323|Drosophila melanogaster AT30609p
protein.
Length = 323
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = -1
Query: 567 TATVILDEEDARK-VACGW*GRVGLNICHIYERIELLR----C-YRCWKYGHKADN-CDG 409
T+ L++EDA K + G+ G + +++ E ++L C + + Y K D C G
Sbjct: 190 TSPHFLEDEDADKFIINGYSGHIPMSVTRFGESNKVLTNRALCSFSDYMYKRKRDTWCCG 249
Query: 408 EDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
+D SR C GH +E + N GH G
Sbjct: 250 QDLSRPSITCPPVGHFV--VYHEDSGMVPNYAGHVPG 284
>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
protein.
Length = 1358
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKK 313
+C C++ GH C + C C GH C N C C K
Sbjct: 476 KCSNCFEMGHVRSKCPRPRKPLVCFICGTMGHAEPRCPN-AICFGCGSK 523
>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
protein.
Length = 1734
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = -1
Query: 459 RCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCPLCNKK 313
+C C++ GH C + C C GH C N C C K
Sbjct: 852 KCSNCFEMGHVRSKCPRPRKPLVCFICGTMGHAEPRCPN-AICFGCGSK 899
>AE013599-1255|AAF58679.2| 323|Drosophila melanogaster CG18335-PA
protein.
Length = 323
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = -1
Query: 567 TATVILDEEDARK-VACGW*GRVGLNICHIYERIELLR----C-YRCWKYGHKADN-CDG 409
T+ L++EDA K + G+ G + +++ E ++L C + + Y K D C G
Sbjct: 190 TSPHFLEDEDADKFIINGYSGHIPMSVTRFGESNKVLTNRALCSFSDYMYKRKRDTWCCG 249
Query: 408 EDRSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHTAG 298
+D SR C GH +E + N GH G
Sbjct: 250 QDLSRPSITCPPVGHFV--VYHEDSGMVPNYAGHVPG 284
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 30.3 bits (65), Expect = 2.6
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = -1
Query: 462 LRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAGTS 292
++CYRC + H ++C R C +C+ H++ C + P C N G H +
Sbjct: 646 VQCYRCQGFRHAKNSC---MRPPRCMKCA-GEHLSSCCTKPRTTPATCVNCSGQHISAYK 701
Query: 291 GCSLFR 274
GC ++
Sbjct: 702 GCPTYK 707
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 29.1 bits (62), Expect = 6.0
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAG 298
E ++CYRC + H ++C R C + S H++ C + P C N G H +
Sbjct: 237 EPVQCYRCQGFRHAKNSC---MRPPRCMK-SAGEHLSSCCTKPRTTPATCVNCSGQHISA 292
Query: 297 TSGCSLFR-EALETASED*PIKKM 229
GC ++ E + A+ + I K+
Sbjct: 293 YKGCPAYKAEKQKLAANNVDINKI 316
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 29.1 bits (62), Expect = 6.0
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = -1
Query: 468 ELLRCYRCWKYGHKADNCDGEDRSRACRRCSEAGHMAGDCVNEQFCP-LC-NKKG-HTAG 298
E ++CYRC + H ++C R C + S H++ C + P C N G H +
Sbjct: 237 EPVQCYRCQGFRHAKNSC---MRPPRCMK-SAGEHLSSCCTKPRTTPATCVNCSGQHISA 292
Query: 297 TSGCSLFR-EALETASED*PIKKM 229
GC ++ E + A+ + I K+
Sbjct: 293 YKGCPAYKAEKQKLAANNVDINKI 316
>BT016021-1|AAV36906.1| 662|Drosophila melanogaster RE15373p
protein.
Length = 662
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 388 TCPTPILAVAVIRFVAIFPAPVTSQQFYSFIYVAYIEPYSSLPPASNLP 534
T P+ AV + + A PAPVT +Q+YS + ++ SS P + P
Sbjct: 243 TAAAPVQAVQQLTYSA--PAPVTQEQYYS-APASVVQQTSSAPAPAPAP 288
>BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p
protein.
Length = 2064
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 496 EPYSSLPPASNLPGILFIQDHRC--RLVFHRPSGLSDLISKLSTFFI 630
E YS +PP +LPGI ++ +HR + + + L S L FF+
Sbjct: 728 ENYSFIPPNVHLPGIKWLDNHRAVFSINVEAVTAIHTLDSFLDRFFL 774
>AE014298-2002|AAN09579.1| 662|Drosophila melanogaster CG11584-PB
protein.
Length = 662
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 388 TCPTPILAVAVIRFVAIFPAPVTSQQFYSFIYVAYIEPYSSLPPASNLP 534
T P+ AV + + A PAPVT +Q+YS + ++ SS P + P
Sbjct: 243 TAAAPVQAVQQLTYSA--PAPVTQEQYYS-APASVVQQTSSAPAPAPAP 288
>AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA
protein.
Length = 2064
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 496 EPYSSLPPASNLPGILFIQDHRC--RLVFHRPSGLSDLISKLSTFFI 630
E YS +PP +LPGI ++ +HR + + + L S L FF+
Sbjct: 728 ENYSFIPPNVHLPGIKWLDNHRAVFSINVEAVTAIHTLDSFLDRFFL 774
>Y15513-1|CAA75667.1| 328|Drosophila melanogaster Prodos protein
protein.
Length = 328
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = -1
Query: 273 EALETASED*PIKKMVFKVL-QINIDRGKA-AHDLLLATASSMSADLVM-LSEPNRKLAK 103
EA+ ++ D P ++++ KV+ Q+ +D+G A + L T + M L+ + +
Sbjct: 5 EAVTVSNVD-PYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCE 63
Query: 102 AAGWECDTRGDAALVLLNKTLTVSEI 25
+G T GD +L L+N +++S +
Sbjct: 64 LSGRTMPTVGDVSLALINMGISISNL 89
>AY071604-1|AAL49226.1| 328|Drosophila melanogaster RE65343p
protein.
Length = 328
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = -1
Query: 273 EALETASED*PIKKMVFKVL-QINIDRGKA-AHDLLLATASSMSADLVM-LSEPNRKLAK 103
EA+ ++ D P ++++ KV+ Q+ +D+G A + L T + M L+ + +
Sbjct: 5 EAVTVSNVD-PYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCE 63
Query: 102 AAGWECDTRGDAALVLLNKTLTVSEI 25
+G T GD +L L+N +++S +
Sbjct: 64 LSGRTMPTVGDVSLALINMGISISNL 89
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 28.7 bits (61), Expect = 7.9
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -1
Query: 402 RSRACRRCSEAGHMAGDCVNEQFCPLCNKKGHT 304
+ + C C GH DC + C C + HT
Sbjct: 460 KKQLCLNCFARGHQLRDCTSMHSCFTCKGRHHT 492
>AE014298-2666|AAF48800.1| 328|Drosophila melanogaster CG7128-PA
protein.
Length = 328
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Frame = -1
Query: 273 EALETASED*PIKKMVFKVL-QINIDRGKA-AHDLLLATASSMSADLVM-LSEPNRKLAK 103
EA+ ++ D P ++++ KV+ Q+ +D+G A + L T + M L+ + +
Sbjct: 5 EAVTVSNVD-PYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCE 63
Query: 102 AAGWECDTRGDAALVLLNKTLTVSEI 25
+G T GD +L L+N +++S +
Sbjct: 64 LSGRTMPTVGDVSLALINMGISISNL 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,368,209
Number of Sequences: 53049
Number of extensions: 687991
Number of successful extensions: 2345
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2314
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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