Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0153
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.6  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 287 KPFSNEGKPLVVQFTVKHEQDID 355
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 287 KPFSNEGKPLVVQFTVKHEQDID 355
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 287 KPFSNEGKPLVVQFTVKHEQDID 355
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 287 KPFSNEGKPLVVQFTVKHEQDID 355
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 287 KPFSNEGKPLVVQFTVKHEQDID 355
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 180 FGKFKLTAGKFFSD-PEDDK 236
           FGK   T   FFSD  +DDK
Sbjct: 203 FGKINRTMRSFFSDNKQDDK 222


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 180 FGKFKLTAGKFFSD-PEDDK 236
           FGK   T   FFSD  +DDK
Sbjct: 203 FGKINRTMRSFFSDNKQDDK 222


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +3

Query: 645 DFLPPKKIKDPEAKKPEDWDDKPT 716
           D +PP+ +  PE +  +  + +PT
Sbjct: 389 DEIPPEPVPTPEPQPTQTTESEPT 412


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 144 FPTNHQETSPQRIH 103
           FP NH    P+++H
Sbjct: 41  FPLNHLNEEPEKLH 54


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 231 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 133
           +P+G       S+  F ++FL   CT  C   N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,618
Number of Sequences: 336
Number of extensions: 4377
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)