Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0153
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0) 44 9e-05
SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_5367| Best HMM Match : wnt (HMM E-Value=0) 28 8.8
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 NARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLK 376
+A+FY +S KF KPF+NEGK LV+QF+VKHEQ+IDCGGGY K
Sbjct: 806 DAKFYGISAKFEKPFTNEGKTLVIQFSVKHEQNIDCGGGYAK 847
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +3
Query: 105 VFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSE 254
V F EKF D SWE WV S G + GKFK TAGKF+ D E DKG++TSE
Sbjct: 756 VHFLEKFEDKSWEDRWVSSTSKGAQQGKFKWTAGKFYGDAEADKGIQTSE 805
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 532 KDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 624
KDD THLYTLIV+PDNTYEV IDNEKVESG
Sbjct: 847 KDDEMTHLYTLIVRPDNTYEVKIDNEKVESG 877
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTI 719
DFLPPK IKDPEAKKPEDWDDK I
Sbjct: 884 DFLPPKTIKDPEAKKPEDWDDKKMI 908
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDK 710
D+ P+ I DP+AKKPEDWDD+
Sbjct: 918 DWDKPQNIPDPDAKKPEDWDDE 939
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTIP 722
D+ K I DPE KKPEDWD IP
Sbjct: 901 DWDDKKMIDDPEDKKPEDWDKPQNIP 926
>SB_49315| Best HMM Match : Calreticulin (HMM E-Value=0)
Length = 1086
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 535 DDVYTHLYTLIVKPDNTYEVLIDNEKVESG 624
D THL+TL+V+PDNT+EV ID E V G
Sbjct: 87 DGKKTHLFTLVVRPDNTFEVFIDQESVNKG 116
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 386 CKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYK 496
C L Q+ +TPY IMFGPD CG +K+H IF +K
Sbjct: 28 CHLFQESFGDKTPYTIMFGPDKCGE-DRKLHFIFRHK 63
Score = 39.1 bits (87), Expect = 0.004
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 654 PPKKIKDPEAKKPEDWDDKPTIP 722
PP +I+DP+ K+PEDWD++ IP
Sbjct: 128 PPAEIEDPDDKRPEDWDEREKIP 150
Score = 31.5 bits (68), Expect = 0.72
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 660 KKIKDPEAKKPEDWDD 707
+KI DP+A+KP+DWD+
Sbjct: 147 EKIPDPDAEKPDDWDE 162
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
P+ + DP KPEDWDD+
Sbjct: 184 PEYVPDPNGIKPEDWDDE 201
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDW-DDKP 713
P KI D AKKPE W DD+P
Sbjct: 165 PVKIPDTNAKKPEGWLDDEP 184
>SB_29195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 35.1 bits (77), Expect = 0.058
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 363 PPQSMSCSCLTVNWTTKGLPSLLNG 289
P + SC CL V W T GLP L++G
Sbjct: 429 PSEQNSCQCLFVGWQTVGLPQLIHG 453
>SB_28048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 167 VLTVHPIAFPRIIRKLLLKEYI 102
+LT H + P++IRK+ LK+Y+
Sbjct: 73 LLTAHLVVAPKLIRKMPLKDYV 94
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 205 PAVNLNFPNSFPGCSLYTQLLSH--ESSGNFSSKNTSQFIEDNASKLTTTSTTAFIFDSQ 32
P+V LNF N+FPG L + +S + SG + + + N + + FI+
Sbjct: 6188 PSVELNFRNTFPGDDLLKRYISDILQDSGGSALDLALEGLNVNIVIVIKAESDPFIYQGA 6247
Query: 31 YHLLQP 14
+ P
Sbjct: 6248 RKVFDP 6253
>SB_5367| Best HMM Match : wnt (HMM E-Value=0)
Length = 367
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 622 QIQLSHCQ*GLHRCCQVSQSECTNVCRHHLCS 527
++Q + C+ H CC+V C H+C+
Sbjct: 336 EVQATRCRCKFHWCCKVKCKTCIKNVTTHICN 367
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,303,447
Number of Sequences: 59808
Number of extensions: 552692
Number of successful extensions: 1470
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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