Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0153
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 118 4e-27
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 117 7e-27
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 110 8e-25
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 70 1e-12
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 61 8e-10
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 54 7e-08
At5g55810.1 68418.m06955 nicotinamide-nucleotide adenylyltransfe... 33 0.14
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 31 0.58
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.77
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.4
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 1.8
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.1
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.1
At5g41320.1 68418.m05022 expressed protein 28 5.5
At3g04160.1 68416.m00440 expressed protein ; expression supporte... 28 5.5
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 28 5.5
At5g46915.1 68418.m05784 transcriptional factor B3 family protei... 28 7.2
At5g58380.1 68418.m07311 CBL-interacting protein kinase 10 (CIPK... 27 9.5
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 118 bits (284), Expect = 4e-27
Identities = 56/109 (51%), Positives = 69/109 (63%)
Frame = +2
Query: 182 WKV*IDCWKVLQRPRG*QRFENL*NARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 361
WK W +G Q E+ RFYA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 362 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNH 508
GGY+K+ ++Q G+TPY IMFGPDICG TKKVH I +Y G NH
Sbjct: 110 GGYMKLLSDDVDQTKFGGDTPYSIMFGPDICGYSTKKVHAILTYNGTNH 158
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTIP 722
D LP KKIKDP AKKPEDWDDK IP
Sbjct: 204 DLLPAKKIKDPSAKKPEDWDDKEYIP 229
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +1
Query: 484 LQLQG*EPFIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 624
L G IKK++ C+ D TH+YT +++PD TY +LIDN + ++G
Sbjct: 151 LTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTG 197
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 INCDVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSE 254
++ +V FEEKF +D WE WV S+ G++K TAG + D +DKG++TSE
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSE 73
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
PK+I D +AKKPEDWDD+
Sbjct: 243 PKEIPDTDAKKPEDWDDE 260
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 117 bits (282), Expect = 7e-27
Identities = 56/109 (51%), Positives = 69/109 (63%)
Frame = +2
Query: 182 WKV*IDCWKVLQRPRG*QRFENL*NARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCG 361
WK W +G Q E+ RFYA+S +F FSN+ K LV QF+VKHEQ +DCG
Sbjct: 53 WKHTAGNWSGDANDKGIQTSEDY---RFYAISAEFPEFSNKDKTLVFQFSVKHEQKLDCG 109
Query: 362 GGYLKVFDCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNH 508
GGY+K+ ++QK G+TPY IMFGPDICG TKKVH I +Y NH
Sbjct: 110 GGYMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNEANH 158
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/38 (52%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 624
IKKD+ C+ D TH+YT I++PD TY +LIDN + ++G
Sbjct: 160 IKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTG 197
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTI 719
D LPPKKIKDP AKKPEDWD++ I
Sbjct: 204 DLLPPKKIKDPSAKKPEDWDEQEYI 228
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +3
Query: 105 VFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDDKGLKTSE 254
V FEE+F DD WE+ WV SE G++K TAG + D +DKG++TSE
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGD-ANDKGIQTSE 73
Score = 34.7 bits (76), Expect = 0.063
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
PK+I D ++KKPEDWDD+
Sbjct: 243 PKEIPDTDSKKPEDWDDE 260
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 110 bits (265), Expect = 8e-25
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +2
Query: 254 NARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 433
+A+ YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +
Sbjct: 80 DAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSL 139
Query: 434 MFGPDICGPGTKKVHVIFSYKGKNH 508
MFGPDICG TKK+HVI SY+G+N+
Sbjct: 140 MFGPDICGTQTKKLHVIVSYQGQNY 164
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 511 IKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGRPRGRLGTSFRLRKSRTLKPRN 690
IKKD++C+ D H YT I++PD +Y VL+DN++ R G + T + + R +K +N
Sbjct: 166 IKKDLQCETDKLNHFYTFILRPDASYSVLVDNKE----REFGSMYTDWDILPPRKIKVKN 221
Query: 691 QK 696
K
Sbjct: 222 AK 223
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +3
Query: 102 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKT 248
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQT 77
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTI 719
D LPP+KIK AKKPEDWDD+ I
Sbjct: 210 DILPPRKIKVKNAKKPEDWDDREYI 234
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
P++I D +AK+PEDWD++
Sbjct: 249 PREIPDRKAKEPEDWDEE 266
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +2
Query: 254 NARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 433
+A+ YA+S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +
Sbjct: 80 DAKHYAISAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSV 139
Query: 434 M 436
+
Sbjct: 140 L 140
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +3
Query: 102 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKT 248
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQT 77
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 645 DFLPPKKIKDPEAKKPEDWDDKPTI 719
D LPP+KIK AKKPEDWDD+ I
Sbjct: 156 DILPPRKIKVKNAKKPEDWDDREYI 180
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
P++I D +AK+PEDWD++
Sbjct: 195 PREIPDRKAKEPEDWDEE 212
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 60.9 bits (141), Expect = 8e-10
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +2
Query: 257 ARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETP 424
AR Y + ++ +P + + +V+Q+ V+ ++ ++CGG YLK + + E+P
Sbjct: 74 ARKYGIVKELDEPLNLKEGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESP 133
Query: 425 YEIMFGPDICGPGTKKVHVIFSYK 496
Y IMFGPD CG GT KVH I +K
Sbjct: 134 YSIMFGPDKCG-GTNKVHFILKHK 156
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 651 LPPKKIKDPEAKKPEDWDDKPTIP 722
+P K I DPE KKPEDWD++ IP
Sbjct: 218 IPAKTIPDPEDKKPEDWDERAKIP 241
Score = 35.9 bits (79), Expect = 0.027
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
P+++ DPEA KPEDWDD+
Sbjct: 275 PEEVDDPEATKPEDWDDE 292
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 538 DVYTHLYTLIVKPDNTYEVLIDNEK 612
D +H+YT I+KPDN +L+D E+
Sbjct: 177 DKLSHVYTAILKPDNEVRILVDGEE 201
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 663 KIKDPEAKKPEDWDD 707
KI DP A KPEDWD+
Sbjct: 239 KIPDPNAVKPEDWDE 253
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDW-DDKP 713
P +I+D EA+KPE W DD+P
Sbjct: 256 PMEIEDEEAEKPEGWLDDEP 275
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 299 NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTK 469
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 92 NEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-ATN 149
Query: 470 KVHVIFSYK 496
KVH I +K
Sbjct: 150 KVHFILKHK 158
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 651 LPPKKIKDPEAKKPEDWDDKPTIP 722
+P K I DPE KKPEDWD++ IP
Sbjct: 220 IPSKTIPDPEDKKPEDWDERAKIP 243
Score = 35.9 bits (79), Expect = 0.027
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDWDDK 710
P +++DPEA KPEDWDD+
Sbjct: 277 PVEVEDPEASKPEDWDDE 294
Score = 33.1 bits (72), Expect = 0.19
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 538 DVYTHLYTLIVKPDNTYEVLIDNEKVESG 624
D+ +H+YT ++K DN +L+D E+ + G
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKG 207
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +3
Query: 657 PKKIKDPEAKKPEDW-DDKP 713
P +I+D EA+KPE W DD+P
Sbjct: 258 PMEIEDEEAEKPEGWLDDEP 277
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 663 KIKDPEAKKPEDWDD 707
KI DP A KP+DWD+
Sbjct: 241 KIPDPNAVKPDDWDE 255
>At5g55810.1 68418.m06955 nicotinamide-nucleotide
adenylyltransferase, putative / NAD(+)
pyrophosphorylase, putative similar to nicotinamide
mononucleotide adenylyl transferase [Homo sapiens]
GI:11245478; contains Pfam profile PF01467:
Cytidylyltransferase
Length = 238
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 216 SDPEDDKGLKTSEMRGSMLSPVSSNRSVMRVNPW*SSSLSNMNKTLTVEADTSRSLTANW 395
+D KGL ++E R M + + + V+PW +S SN +TLTV + LT N
Sbjct: 64 NDAYKKKGLLSAEHRLEMCNVSCQSSDFVMVDPW-EASQSNYQRTLTVLSRVKTFLTTN- 121
Query: 396 SRRTCTERLH-MRLCSA 443
R E L M LC +
Sbjct: 122 -RHVPEESLKVMLLCGS 137
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 220 SLKNFPAVNLNFPNSFPGC-SLYTQLLSHES-SGNFSSKNTSQFIEDNASKLTTTSTTAF 47
S+K+ P +++ PNS P C + + + L + +G K + +I NA +L T + + +
Sbjct: 332 SIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPEDKEIAVYILGNALRLNTATISRY 391
Query: 46 IFDSQY 29
S++
Sbjct: 392 FSSSRF 397
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 320 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 433
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 320 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 430
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 408 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 280
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 148 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 59
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -2
Query: 414 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 313
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At5g41320.1 68418.m05022 expressed protein
Length = 515
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 286 ELTGESIE--PRISEVFKPLSSSGSLKNFPAVNLNFPNSFPG 167
+L+ S++ P S +F LSSS L++FP + FP+S G
Sbjct: 353 QLSSSSLQSFPVHSSLFPKLSSSSLLQSFPVPSSLFPSSSQG 394
>At3g04160.1 68416.m00440 expressed protein ; expression supported
by MPSS
Length = 712
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +2
Query: 254 NARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 433
N +F+AL FK E V+ F ++ + C G + D +L KD+ E P+E
Sbjct: 350 NGKFFALDM-FKQCIVESASQVMLFRLEGTRS-KCSGVVEDLDDARLRNKDVIMEKPFEN 407
Query: 434 MFGPDICGPGTKKVHVI 484
G + CG VI
Sbjct: 408 SSGGE-CGKTLDSPQVI 423
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +3
Query: 174 KEFGKFKLTAGKFFSDPEDDKGLKTSEMRGSMLSPVSSNRSVMRVNPW*SSSLSNMNKTL 353
K+ K T K+FS+ +++ TSE+ M V +NR +R+ SS+ NK
Sbjct: 108 KKVNKASETFDKYFSNGGENRSGSTSELATWMEKNVEANRHSVRLRTKRPSSILE-NKEN 166
Query: 354 TVEADTSR 377
+ A++SR
Sbjct: 167 SGVAESSR 174
>At5g46915.1 68418.m05784 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 288
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 577 DNTYEVLIDNEKVESGRPRGRLGTSFRLRKSRTLKPRNQK 696
DNT L E ++ +PR L +S R+R+ RT + + K
Sbjct: 88 DNTLGTLDGKEMMQPPQPRAFLASSSRIRRFRTEQGEDDK 127
>At5g58380.1 68418.m07311 CBL-interacting protein kinase 10 (CIPK10)
identical to CBL-interacting protein kinase 10
[Arabidopsis thaliana] gi|13249119|gb|AAK16685; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain; identical to cDNA CBL-interacting
protein kinase 10 (CIPK10) GI:13249118
Length = 479
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -2
Query: 585 GVVRFHNQSVQMCVDIIFAADIFFDEWFLPL*LKITCTFLVPGPQ 451
G + FH+ ++ I AD WF P ++ C L P P+
Sbjct: 208 GYLPFHDSNLMEMYRKIGKADFKAPSWFAPEVRRLLCKMLDPNPE 252
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,050,247
Number of Sequences: 28952
Number of extensions: 382817
Number of successful extensions: 1079
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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