Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0152
         (756 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.65 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   6.1  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 174 TVHNVT-VSGCEESSSHCILKRNTDATIACSLHHC 275
           T +N++ +S C+ +    I K+N  A  AC L  C
Sbjct: 32  TYNNISSISECKNNGECVINKKNRTACKACRLRKC 66


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 514 FIERKLSRPCSLWSSHFT 461
           F+ R    P  LW+SH T
Sbjct: 425 FVARNSDTPIILWTSHLT 442


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 295 YRSSRGHHEHPDTVPP 342
           Y SS+ HH H    PP
Sbjct: 48  YASSQHHHHHLQARPP 63


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 694 VSEINQNNFYLP 659
           VSEI++N +YLP
Sbjct: 58  VSEISENFYYLP 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,691
Number of Sequences: 336
Number of extensions: 3941
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)