Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0152
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0785 - 5873244-5873357,5873458-5873562,5874333-5874424,587...    31   0.99 
08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429...    30   1.7  
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379...    29   4.0  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    29   5.3  
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117...    28   7.0  
08_02_0280 + 15266400-15266501,15266572-15266904,15267020-152670...    28   9.2  
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415...    28   9.2  
01_06_0637 + 30763657-30763858,30765600-30766261                       28   9.2  

>06_01_0785 -
           5873244-5873357,5873458-5873562,5874333-5874424,
           5874525-5874594,5875080-5875202,5875287-5875372,
           5875547-5875648,5875874-5876096,5876217-5876282,
           5876407-5876497,5876574-5876701,5877734-5877749,
           5878171-5878318,5878440-5878511,5878586-5878690,
           5879122-5879291,5880093-5880424
          Length = 680

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 508 ERKLSRPCSLWSSHFTSTVTLG*DFRIGSVAL*SAQGSLLEGAGQP 371
           E+ ++ P   W S  T+ V  G D R+G +AL +  G LL   G+P
Sbjct: 63  EKPVAAPYGSWRSPITADVVSGADKRLGGIAL-AGDGRLLWIEGRP 107


>08_02_0685 +
           20039318-20040433,20040574-20040982,20042906-20042973,
           20043336-20043518,20043641-20043964,20045653-20045694
          Length = 713

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 186 VTVSGCEESSSHCILKRNTDATIACSLHHCTTSIA 290
           V +S C     HC+L  ++ A  AC+  +CT ++A
Sbjct: 532 VILSSCRCCHRHCLLLADSPAYCACAKSNCTIAVA 566


>05_04_0206 +
           19034259-19035462,19036870-19037045,19037752-19037975,
           19038133-19038914,19039337-19039494
          Length = 847

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 247 PRSPAVYTTAQHRSHKYRSSRGHHEHPDTVPP 342
           PR PAV +  +    K+R++  HH+H ++ PP
Sbjct: 308 PRPPAVSSKKKKGKGKHRAA--HHQHTESAPP 337


>07_03_1530 +
           27502546-27502671,27503487-27503561,27504670-27504746,
           27505576-27507522,27508478-27508946,27509898-27510079,
           27510746-27511208,27511295-27511691,27511810-27511937,
           27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 275 HNIDRINTEVHGVIMNIPIPFPLPESDACKDNGL 376
           H++D  + E H ++ +IP   PL   +AC  N L
Sbjct: 585 HSLDTPDGEKHILLKDIPSTIPLDLKNACSQNSL 618


>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
            1171148-1171398,1171442-1171687,1172220-1172415,
            1172796-1172876,1172966-1173169,1173671-1173880,
            1173953-1174174,1174437-1174480,1174974-1175052,
            1175066-1175227,1175337-1175564,1175786-1175815,
            1175905-1176273,1176356-1176571,1177202-1177683,
            1177930-1177975
          Length = 1352

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 265  YTTAQHRSHKYRSSRGHHEHPDTVPPAGV*RVQGQRADLPPQGGN 399
            + T  HR H +R    HH+H  +  P    R  GQ+A    +GGN
Sbjct: 1310 HKTGHHRHH-HRHHHHHHDHRSSSEPNDKKRQDGQKA---LEGGN 1350


>08_02_0280 +
           15266400-15266501,15266572-15266904,15267020-15267083,
           15267924-15267976,15268248-15268303,15268986-15269054,
           15269187-15269372,15270241-15270328
          Length = 316

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +1

Query: 331 TVPPAGV*RVQGQRADLPPQGGNPG 405
           TV P GV  ++    D+PPQGG PG
Sbjct: 92  TVHPIGVPHLR-DGVDVPPQGGRPG 115


>05_01_0498 +
           4152729-4152820,4153316-4153425,4153840-4153877,
           4154335-4154433,4154461-4157475
          Length = 1117

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 344 PESDACKDNGLTCPLKEGTLGGL 412
           PE+D C  +G+TC   EG + GL
Sbjct: 186 PEADVCSWHGVTCLTGEGIVTGL 208


>01_06_0637 + 30763657-30763858,30765600-30766261
          Length = 287

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 420 LLYNPPRVPSLRGQVSPLSLHASDSGRGNGIGMFMMTP 307
           LL +P R P+ R  +SP S     SGRG   G+ + TP
Sbjct: 39  LLPSPKRTPTCR--LSPSSRRLDRSGRGREEGLNLKTP 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,553,735
Number of Sequences: 37544
Number of extensions: 451709
Number of successful extensions: 1187
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)