BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0152
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 49 2e-05
BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 49 2e-05
AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 49 2e-05
X82494-1|CAA57876.1| 1184|Homo sapiens fibulin-2 protein. 32 2.6
BC051690-1|AAH51690.1| 1184|Homo sapiens fibulin 2 protein. 32 2.6
AY130459-1|AAN05436.1| 1231|Homo sapiens fibulin 2 protein. 32 2.6
AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein. 32 2.6
>X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue
specific mRNA. ).
Length = 151
Score = 49.2 bits (112), Expect = 2e-05
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +2
Query: 302 VHGVIMNIPIPFPLPESDACKDNGLTCPLKE 394
VHG++M +P+PFP+PE D CK +G+ CP+++
Sbjct: 74 VHGILMGVPVPFPIPEPDGCK-SGINCPIQK 103
>BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type
C2 protein.
Length = 151
Score = 49.2 bits (112), Expect = 2e-05
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +2
Query: 302 VHGVIMNIPIPFPLPESDACKDNGLTCPLKE 394
VHG++M +P+PFP+PE D CK +G+ CP+++
Sbjct: 74 VHGILMGVPVPFPIPEPDGCK-SGINCPIQK 103
>AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type
C2 precursor variant protein.
Length = 151
Score = 49.2 bits (112), Expect = 2e-05
Identities = 16/31 (51%), Positives = 26/31 (83%)
Frame = +2
Query: 302 VHGVIMNIPIPFPLPESDACKDNGLTCPLKE 394
VHG++M +P+PFP+PE D CK +G+ CP+++
Sbjct: 74 VHGILMGVPVPFPIPEPDGCK-SGINCPIQK 103
>X82494-1|CAA57876.1| 1184|Homo sapiens fibulin-2 protein.
Length = 1184
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 329 IPFPLPESDACKDNGLTCPLKEGTLGG 409
IP PLP+ + CKDNG C T+GG
Sbjct: 673 IPLPLPQPNTCKDNG-PCKQVCSTVGG 698
>BC051690-1|AAH51690.1| 1184|Homo sapiens fibulin 2 protein.
Length = 1184
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 329 IPFPLPESDACKDNGLTCPLKEGTLGG 409
IP PLP+ + CKDNG C T+GG
Sbjct: 673 IPLPLPQPNTCKDNG-PCKQVCSTVGG 698
>AY130459-1|AAN05436.1| 1231|Homo sapiens fibulin 2 protein.
Length = 1231
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 329 IPFPLPESDACKDNGLTCPLKEGTLGG 409
IP PLP+ + CKDNG C T+GG
Sbjct: 673 IPLPLPQPNTCKDNG-PCKQVCSTVGG 698
>AY130458-1|AAN05435.1| 1231|Homo sapiens fibulin 2 protein.
Length = 1231
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 329 IPFPLPESDACKDNGLTCPLKEGTLGG 409
IP PLP+ + CKDNG C T+GG
Sbjct: 673 IPLPLPQPNTCKDNG-PCKQVCSTVGG 698
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,309,062
Number of Sequences: 237096
Number of extensions: 2424125
Number of successful extensions: 5240
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5238
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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