Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0151
(764 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0234 + 15187065-15188241,15188316-15188494 40 0.002
04_03_0649 - 18402976-18403220,18403305-18404499 37 0.015
10_08_0011 + 14088375-14089241 33 0.19
10_08_0009 + 14075929-14076789 31 1.3
07_01_0519 + 3863113-3863498,3863587-3863602 31 1.3
11_01_0051 + 391254-391343,391460-391862,392345-392352,393627-39... 30 1.8
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 30 1.8
11_01_0605 + 4821363-4823246 29 3.1
03_02_0687 + 10413338-10413430,10413538-10413934,10414040-104141... 29 3.1
10_08_0007 + 14044844-14045767 28 7.1
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 28 7.1
01_03_0028 - 11783122-11783381,11783668-11784163 28 7.1
09_04_0648 - 19209916-19210029,19210277-19210350,19210548-192106... 28 9.4
04_04_1428 + 33522795-33523489,33525463-33525620,33525838-33526235 28 9.4
04_04_1241 + 32009641-32010309 28 9.4
>11_04_0234 + 15187065-15188241,15188316-15188494
Length = 451
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 352 YSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 462
+S M ++K+ R +FI S ++ + FDGLDL W +P
Sbjct: 129 FSRMASEKNLRRAFINSSIELARANGFDGLDLAWRFP 165
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Frame = +1
Query: 280 SLRSKHPDVKFMVAVG-GWAEGGSK----------YSHMVAQKSTRMSFIRSVVDFLKKY 426
++++K+ VK ++++G G GG+ ++ M A ++R +FI + V ++
Sbjct: 99 AVKAKNAAVKTVLSIGRGGGAGGAAAVAGSGSDPAFAAMAADPASRAAFIGAAVKVAREN 158
Query: 427 DFDGLDLDWEYPGAA 471
FDGLD+ W +P +A
Sbjct: 159 GFDGLDVAWRFPASA 173
>10_08_0011 + 14088375-14089241
Length = 288
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 280 SLRSKHPDVKFMVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDW 453
++++ HP+V MV +GG + + + + S + + SV + Y DG+D+D+
Sbjct: 73 AVKAAHPNVSVMVGLGGDSVQDTAKVFFSPTSVDSWVANAVASVSGIIDAYGLDGVDVDY 132
Query: 454 EYPGAADRGGSFSDKDKFCI 513
E+ D GG+ D CI
Sbjct: 133 EH--FNDDGGAGVDTFVECI 150
>10_08_0009 + 14075929-14076789
Length = 286
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 286 RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVD----FLKKYDFDGLDLDW 453
++ HP++ ++A+GG + + A S+ +++R+ D + Y DG+D+D+
Sbjct: 75 KAAHPNLSVILALGGDTVQNTGVNATFAPTSSVDAWVRNAADSVSGLIDAYGLDGVDVDY 134
Query: 454 EY 459
E+
Sbjct: 135 EH 136
>07_01_0519 + 3863113-3863498,3863587-3863602
Length = 133
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -3
Query: 330 TANRDHELDIGVFGAEGCEVTETTLTTSNSGSIMRTSLDFSVTPIKE*IKWV 175
TAN+DH+ D G EG + E +T S+ +T+ + S +K +KW+
Sbjct: 64 TANKDHDDDGDGGGDEGSK--EVVVTVVPKSSLKKTNCEDSKNVVKGNVKWM 113
>11_01_0051 +
391254-391343,391460-391862,392345-392352,393627-393704,
395371-395763
Length = 323
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = -3
Query: 477 PVSGTGILPVQIQTVEVIFLQEVDNASDEGHPSALLGHHV*VLGAAFSPTANRDHELDIG 298
PV+GT + ++ + + LQ + + E HP L G+ +L N D D G
Sbjct: 194 PVAGTKVYKLKYGSAVQVVLQGTNIFAGENHPIHLHGYDFYILAEGL---GNFDAGADTG 250
Query: 297 VFGAEGCEVTETTLTTSNSGSIMRTSLD 214
F E + T N +++R D
Sbjct: 251 KFNVEDPPMRNTVGVPVNGWAVIRFVAD 278
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 176 THLIYSFIGVTEKSSEVLIIDPELDVVRVVSVTSHPSAPNTPMSSSWSRLA-VGLKAAPS 352
T L+ S G + S P V + S P++ P S + A VG AAP
Sbjct: 732 TDLLTSSAGAEKASKPAATPGPAPQAVPLPKPVSIPASGPAPAPVSATTAAPVGAAAAPI 791
Query: 353 THTWWPRRALGCPSSEALSTS 415
+ P A+G PS+ A + S
Sbjct: 792 SEPTAPAAAIGMPSATARAAS 812
>11_01_0605 + 4821363-4823246
Length = 627
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 629 TQLWYMISLHQPEISKRYGSSQLPSSTGSDERPL*LLDEIQNLSLSEKEPPR 474
T + + L + ++SK Y S Q+PSS + ER + L NLS E P+
Sbjct: 505 TNIGTFLKLERLDLSKNYLSGQVPSSVANLERLMCLFLSDNNLSGPLPELPK 556
>03_02_0687 +
10413338-10413430,10413538-10413934,10414040-10414168,
10414370-10414517,10414647-10415925
Length = 681
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -3
Query: 477 PVSGTGILPVQIQTVEVIFLQEVDNASDEGHPSALLGHHV*VLGAAF 337
PV GT + V+ V I Q+ + E HP + G+H VL F
Sbjct: 550 PVKGTKLYRVRYGAVVQIVFQDTGIFAAEEHPMHIHGYHFYVLATGF 596
>10_08_0007 + 14044844-14045767
Length = 307
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 280 SLRSKHPDVKFMVAVGGWAEGGSK-YSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWE 456
S++ +P+V+ V++GG + ++ + S + + S+ ++ + DG+D+D+E
Sbjct: 95 SIKQSNPNVRVAVSMGGATVNDRPVFFNITSVDSWVNNAVESLTGIIQDNNLDGIDIDYE 154
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +2
Query: 266 SVTSHPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRALGCPSSEALSTS*RNMTSTVWI 445
S +S P+A ++P SSSW L L AA S+ + SS A + S M S
Sbjct: 15 SSSSSPTAASSPPSSSWIHLRSLLVAAASSSS--------SASSSAAAGSSVAMVSASAP 66
Query: 446 WTGSIPVPLTGVAPSP 493
S P P AP+P
Sbjct: 67 AASSSPSPSPAPAPAP 82
>01_03_0028 - 11783122-11783381,11783668-11784163
Length = 251
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 412 FLKKYD-FDGLDLDWEYPGAADRGGSFSDKDK 504
F+ K++ DG D DW++P AD F D D+
Sbjct: 187 FVGKHNKMDGSDYDWDWPHTADVYYRFFDPDR 218
>09_04_0648 -
19209916-19210029,19210277-19210350,19210548-19210617,
19210873-19211088
Length = 157
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -1
Query: 563 LPSSTGSDERPL*---LLDEIQNLSLSEKEPPR 474
+P+STG+ P+ L DE+Q LS S+ PPR
Sbjct: 41 VPTSTGARASPIDVEALDDEVQTLSASQVPPPR 73
>04_04_1428 + 33522795-33523489,33525463-33525620,33525838-33526235
Length = 416
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 295 HPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSF 393
+P ++ A GG GG+ YSH A + +F
Sbjct: 93 YPTSHYLAAAGGAGGGGNPYSHFTAAAAAGSTF 125
>04_04_1241 + 32009641-32010309
Length = 222
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 338 SAQPPTATMNLTSGCLERRDVKLRKPLLLRPTQ 240
S+QPPTAT +G RR + +P L R T+
Sbjct: 2 SSQPPTATAGFIAGGRIRRPLPRERPHLTRCTK 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,092,795
Number of Sequences: 37544
Number of extensions: 593353
Number of successful extensions: 1603
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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