Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0151
(764 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 79 5e-15
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 79 5e-15
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 71 8e-13
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 71 1e-12
SB_46245| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_42786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 31 1.3
SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 30 1.8
SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031) 29 5.4
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 79.0 bits (186), Expect = 4e-15
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWA-EGG--SKYSHMVAQKSTRMSFIRSVVDFLKKYDFD 435
++ L+ K+P +K ++AVGGW E G S +S MVA KS R +FI S++ KYDFD
Sbjct: 455 YKEINDLKLKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFD 514
Query: 436 GLDLDWEYPGAADRGGS-FSDKDKFCI 513
G DLDWEYP A RG S DK F I
Sbjct: 515 GFDLDWEYP--ASRGNSPPQDKQHFTI 539
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 95 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEV 226
VCYF+NWA YRP ++ +DI LCTH++Y+F + ++++
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLLCTHIVYAFAKIDPATNKI 444
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 564 LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGNLGP 686
LTAAV + + Y V +L LD I++M+YDL G P
Sbjct: 562 LTAAVSAGHGTVDAAYEVHKLAGILDWINLMTYDLHGPWEP 602
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 78.6 bits (185), Expect = 5e-15
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDG 438
++ +L+ +P +K +AVGGW E S +S MVA K R FI+S ++ L+ + FDG
Sbjct: 78 YQRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDG 137
Query: 439 LDLDWEYPGAADRGGS-FSDKDKFCI 513
LDLDWEYPG RGGS SDK +F +
Sbjct: 138 LDLDWEYPGM--RGGSPKSDKGRFTL 161
Score = 77.4 bits (182), Expect = 1e-14
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDG 438
++ +L+ +P +K +AVGGW E S +S MVA K R FI+S ++ L+ FDG
Sbjct: 463 YKRINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDG 522
Query: 439 LDLDWEYPGAADRGGS-FSDKDKFCI 513
LDLDWEYPG RGGS SDK +F +
Sbjct: 523 LDLDWEYPGM--RGGSPKSDKGRFTL 546
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +2
Query: 38 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKS 217
LAVL CA V + R CY++NW+ YRP G + EDI LCTH+++SF V + +
Sbjct: 7 LAVLG-CALSVTASEYVR-GCYYTNWSQYRPKGGTFWPEDIDPFLCTHILFSFAKVNQTT 64
Query: 218 SEVLIID 238
++ I +
Sbjct: 65 HKLDIYE 71
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/53 (45%), Positives = 31/53 (58%)
Frame = +2
Query: 38 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSF 196
LA+L C R VCY++NW+ YRP G + EDI LCTH+I+SF
Sbjct: 391 LAILILCFVPFAVSEYVR-VCYYTNWSQYRPKGGTFWPEDIDPHLCTHVIHSF 442
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +3
Query: 519 QELKRAFIRAGR--GWE---LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGNLG 683
QEL+ AF + G E LTAAV + + + Y + + + LD I+VM+YDL G
Sbjct: 549 QELRDAFEAEAKDSGKERLLLTAAVAAGLWTIKDAYDIEGISKPLDWINVMTYDLHGTWE 608
Query: 684 P 686
P
Sbjct: 609 P 609
Score = 32.3 bits (70), Expect = 0.44
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 564 LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRG 674
LTAAV + + Y + ++ + LD I++M+YDL G
Sbjct: 184 LTAAVAAGLWTIKGAYDIADIAEPLDWINLMTYDLHG 220
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 78.6 bits (185), Expect = 5e-15
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGW--AEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDG 438
+ F +L+ K+P++K ++AVGGW S +S MV +TR FI SV+ L+ + FDG
Sbjct: 75 YPRFNALKQKNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGFDG 134
Query: 439 LDLDWEYPGAADRGGS-FSDKDKFCI 513
LDLDWEYP A RGGS DK +F +
Sbjct: 135 LDLDWEYP--ATRGGSPPEDKQRFTV 158
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +2
Query: 35 TLAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEK 214
TL VLA A + R VCY +NW+ YR G ++ EDIP DLCTHL+YSF + +K
Sbjct: 5 TLLVLAVAACATGNYVR---VCYHTNWSQYRQGRAKFWPEDIPADLCTHLMYSFAKINQK 61
Query: 215 S 217
+
Sbjct: 62 N 62
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 71.3 bits (167), Expect = 8e-13
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWAEGGSK--YSHMVAQKSTRMSFIRSVVDFLKKYDFDG 438
++ F L+ K+P +K ++AVGGW K +S MV ++R FI S + L++++FDG
Sbjct: 187 YKEFNDLKLKNPGLKTLLAVGGWNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDG 246
Query: 439 LDLDWEYPGAADRGGSF-SDKDKFCI 513
DLDWEYPG +R GS DK +F I
Sbjct: 247 FDLDWEYPG--NRVGSDPGDKQRFTI 270
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 564 LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGNLGP 686
LTAAV + + Y V ++ Q LD I++M+YDLRG P
Sbjct: 293 LTAAVAAGKATIDKAYEVDKIGQILDLINLMAYDLRGMWEP 333
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLD 444
++ L+S ++K ++AVGGW G + MV+ S R FI + FL+ + FDGLD
Sbjct: 78 YKKVNDLKSSS-NMKTLLAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMFDGLD 136
Query: 445 LDWEYPGAADRGGSFSDKDKFCI 513
LDWEYPGA RG DK +F +
Sbjct: 137 LDWEYPGA--RGSPPEDKHRFTL 157
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +2
Query: 38 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKS 217
L +L ++L S S R VCY++NWA YR G+ +Y ++I LCTH++Y+F + +
Sbjct: 7 LPLLVVPSSLFASASYFR-VCYYTNWAQYR-GLAKYTPDNIDPSLCTHIVYAFAKMNADN 64
Query: 218 SEVLIID 238
S++ + +
Sbjct: 65 SKLAMFE 71
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 564 LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGN 677
LTAAV + GY + L Q LD I++MSYDL G+
Sbjct: 180 LTAAVSAGETTVKNGYEISALGQALDWINLMSYDLHGD 217
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +1
Query: 265 FRNFTSLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLD 444
++ L+S ++K ++AVGGW G + MV+ S R FI + FL+ + FDGLD
Sbjct: 2 YKKVNDLKSSS-NMKTLLAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMFDGLD 60
Query: 445 LDWEYPGAADRGGSFSDKDKFCI 513
LDWEYPGA RG DK +F +
Sbjct: 61 LDWEYPGA--RGSPPEDKHRFTL 81
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 564 LTAAVPLANFRLMEGYHVPELCQELDAIHVMSYDLRGN 677
LTAAV + GY + L Q LD I++MSYDL G+
Sbjct: 104 LTAAVSAGETTVKNGYEISALGQALDWINLMSYDLHGD 141
>SB_46245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 31.9 bits (69), Expect = 0.58
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +2
Query: 284 SAPNTPM--SSSWSRLAVGLKAAPSTHTWWPRRALGC-PSSEALSTS*R--NMTSTVWIW 448
S P+TP+ SSS +R A L A H + + G P E ST +M ST +
Sbjct: 122 SVPSTPILTSSSLARAAPDLSAV---HPYTDLQQFGALPLIEVASTPKLTFSMPSTPKLT 178
Query: 449 TGSIPVPLTGVAPSPIKTSS 508
S+ +PL VA +PI TSS
Sbjct: 179 FSSLALPLIAVASTPILTSS 198
>SB_42786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 507 ELVFIGEGATPVSGTGILPVQIQTVEVIFLQEVDNASDE 391
E +FIG+ V G+G +QT ++ + V N SDE
Sbjct: 376 ESLFIGQRPCDVRGSGTRTTDVQTACLVIINSVQNISDE 414
>SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 1009
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 136 WTLWHRRHPRGFVYPLDLFLYWRH 207
W +HR HP FVYPL +Y H
Sbjct: 477 WYAFHRDHPPMFVYPLPFEIYIDH 500
>SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 38 LAVLASCAALVQSDSRARIVCYFSNWAVYRPGVG-RYGIEDIPVDLCTHLIYSFIGVTEK 214
+ +LA+ A L + +A IV +N+A+ G + VD C E
Sbjct: 227 MELLATMADLTEILQKALIVYIRNNYAMGNQHFGLNKAVIAYVVDSCQKCGLDSHTSNEN 286
Query: 215 SSEVLIIDPELDVVRVVSVTSHPSAPN 295
SS +I+ PEL V+ +V + PS+P+
Sbjct: 287 SSPDVIVTPELPVIPNGAVKAIPSSPS 313
>SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 900
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 136 WTLWHRRHPRGFVYPLDLFLYWRH 207
W +HR HP FVYPL +Y H
Sbjct: 314 WYAFHRDHPPLFVYPLPFEIYIDH 337
>SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +2
Query: 32 ATLAVLASCAALVQSDSRARIVCYFSNWAVYRPGVGRYGIEDIPVDLC--THLIYSFIGV 205
A LA + + AL + +R++ +++ Y GV GI + D C TH +Y+++ V
Sbjct: 485 AKLAYIGA-GALAIGYAASRLLSAYTHAYTYAEGVAD-GIRLLETDTCVATHRVYAYVYV 542
Query: 206 TEKSSEVLIIDPELD 250
+ + + D ELD
Sbjct: 543 MARRNGKRMSDEELD 557
>SB_53427| Best HMM Match : RVT_1 (HMM E-Value=0.031)
Length = 969
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Frame = +2
Query: 251 VVRVVSVTSH-PSAPNTPMSSSWSRLAV---GLKAAPSTHTW---WPRRALGCPSSEALS 409
VV V S TS PS+PNTP + SRL + ++A+P ++ + RR+L P S
Sbjct: 110 VVAVYSPTSTAPSSPNTPRHQTDSRLPIAKTSIEASPQPISYSSPFARRSLYSPIRPRYS 169
Query: 410 TS*R 421
+S R
Sbjct: 170 SSPR 173
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,433,751
Number of Sequences: 59808
Number of extensions: 612193
Number of successful extensions: 1693
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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