Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0151
         (764 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si...    61   7e-10
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si...    58   5e-09
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si...    58   5e-09
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si...    55   5e-08
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si...    53   2e-07
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si...    51   7e-07
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si...    50   2e-06
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si...    46   3e-05
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si...    40   0.002
At5g53510.1 68418.m06650 oligopeptide transporter OPT family pro...    30   1.5  
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f...    30   1.5  
At5g09540.1 68418.m01105 DNAJ heat shock N-terminal domain-conta...    28   5.9  
At1g24300.1 68414.m03066 GYF domain-containing protein contains ...    28   7.8  

>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 379

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +1

Query: 265 FRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGL 441
           F  FT +++ ++P VK ++++GG     + Y+ M +  ++R SFI S +   + Y F GL
Sbjct: 76  FSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGL 135

Query: 442 DLDWEYPGAADRGGSF 489
           DLDWEYP +A    +F
Sbjct: 136 DLDWEYPSSATEMTNF 151


>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 398

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 253 SKSGFRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYD 429
           +++ F  FT +++ ++P VK ++++GG       ++ M +   +R SFI+S +   + Y 
Sbjct: 51  NQAPFHAFTETVQQRNPHVKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYG 110

Query: 430 FDGLDLDWEYP 462
           F GLDLDWEYP
Sbjct: 111 FHGLDLDWEYP 121


>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 363

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 247 GRSKSGFRNFTSL-RSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKK 423
           G  +  F NFT + + K+P V+ ++++GG     S ++ M +  ++R SFI S +   + 
Sbjct: 59  GAHEQEFSNFTKIVKKKNPHVQTLLSIGGRNADKSAFASMASNPTSRKSFIWSAISSARY 118

Query: 424 YDFDGLDLDWEYP 462
           Y FDGLDL W+YP
Sbjct: 119 YRFDGLDLVWKYP 131


>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 365

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +1

Query: 193 LYWRHREIKRSSHYRS*VGRSKSGFRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVA 369
           L+    ++  S+H  +    +   F +FT +++ K+ DV+ ++++GG     +  + M +
Sbjct: 48  LFCAFADVDSSTHEVTISAANSYQFSSFTETVKEKNTDVQTLLSIGGKDADKAVLASMAS 107

Query: 370 QKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 462
               R +FI S +D  +K DF GLDL WEYP
Sbjct: 108 NSKNRKAFIDSSIDIARKKDFYGLDLAWEYP 138


>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 362

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 193 LYWRHREIKRSSHYRS*VGRSKSGFRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVA 369
           L+    ++  S+H  +    +     +FT +++ K+ DV+ ++++GG     +  + M +
Sbjct: 40  LFCAFADVDSSTHEVTISAANSCQVSSFTHTVKDKNTDVQTLLSIGGKDADKAVLASMAS 99

Query: 370 QKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 462
               R +FI S +D  +K DF GLDL WEYP
Sbjct: 100 NSKNRKAFIDSSIDIARKKDFYGLDLAWEYP 130


>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
           similar to chitinase/lysozyme GI:467689 from [Nicotiana
           tabacum]
          Length = 366

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = +1

Query: 250 RSKSGFRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKY 426
           R+K  F  FT ++R ++P VK ++++GG       ++ M +  ++R  FI S +   +  
Sbjct: 69  RNKPKFSTFTQTVRRRNPTVKTLLSIGGDFTYNFAFASMASNPTSRKLFISSSIKLARSC 128

Query: 427 DFDGLDLDWEYPGAADRGGSF 489
            F GLDL+W+YP       +F
Sbjct: 129 GFHGLDLNWKYPSITTEMDNF 149


>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:505267 from [Nicotiana
           tabacum]
          Length = 332

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +1

Query: 265 FRNFT-SLRSKHPDVKFMVAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGL 441
           F  FT +++ ++P VK ++++GG     S ++ M +   +R +FI S +   +   F GL
Sbjct: 67  FSTFTETVKIRNPQVKTLLSIGGKNANNSAFASMASNHQSRKTFIDSWIFIARSNGFHGL 126

Query: 442 DLDWEYP 462
           DL WEYP
Sbjct: 127 DLAWEYP 133


>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 261

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +1

Query: 361 MVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADRGGSFSD 495
           M +    R SFI S +   + Y FDGLDLDWEYP  A     F++
Sbjct: 1   MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPRNAAEMSDFAE 45


>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
           similar to chitinase, class V GI:899342 from [Nicotiana
           tabacum]
          Length = 289

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +1

Query: 346 SKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 462
           S ++ +V+ +++R SFI S +   +   F GLDL WEYP
Sbjct: 74  STFTEIVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112


>At5g53510.1 68418.m06650 oligopeptide transporter OPT family
           protein similar to SP|P40900 Sexual differentiation
           process protein isp4 {Schizosaccharomyces pombe},
           oligopeptide transporter Opt1p [Candida albicans]
           GI:2367386; contains Pfam profile PF03169: OPT
           oligopeptide transporter protein
          Length = 741

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 371 WATMCEYLEPPSAQPPTATMNLTSG 297
           WAT+  YL  P A P  AT+N+T G
Sbjct: 272 WATISSYLGSPLASPLFATINVTIG 296


>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc
           finger (ZZ type) family protein contains Pfam profiles
           PF02135: TAZ zinc finger, PF00569: Zinc finger, ZZ type
          Length = 1706

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 278 HPSAPNTPMSSSWSRLAVGLKAAPSTHTWWPRRA 379
           HP    +  S+S+S LAVG+K+  S    WP ++
Sbjct: 534 HPQNIGSDSSNSFSNLAVGVKSESSPQGQWPSKS 567


>At5g09540.1 68418.m01105 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 280

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 311 SWSRLAVGLKAAPSTHTWWPRRALGCPSSEALSTS*RNMTST 436
           SW+   VGL + P+T  W P   L   + ++ S    N+ +T
Sbjct: 223 SWAMFPVGLTSHPNTSNWSPISHLSVCTGQSSSDQQSNLKAT 264


>At1g24300.1 68414.m03066 GYF domain-containing protein contains
           Pfam profile: PF02213 GYF domain
          Length = 1417

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 408 DNASDEGHPSALLGHHV*VLGAAFS-PTANRDHELDIGVFGA 286
           DN S + + S LLG H   LGAA S P  N       G FGA
Sbjct: 299 DNGSMKNNDSGLLGSHNGGLGAASSVPRLNSVASESYGSFGA 340


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,290,560
Number of Sequences: 28952
Number of extensions: 430406
Number of successful extensions: 1140
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)