Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0150
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0012 + 19251085-19251666                                         28   7.2  
05_03_0155 - 9002049-9002134,9002825-9004139                           28   9.5  

>11_06_0012 + 19251085-19251666
          Length = 193

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 456 WLTGS*AGYVGTWPDGTMXS 515
           WLTG+ AG  G WP G + S
Sbjct: 136 WLTGAVAGQRGRWPAGAVAS 155


>05_03_0155 - 9002049-9002134,9002825-9004139
          Length = 466

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 20/62 (32%), Positives = 27/62 (43%)
 Frame = +3

Query: 192 TDXQTIHTSNNKTPDXKIVKMLTYWSXSGTXYIXXQVASSXSGKKRGLXPSDAPLVRDSD 371
           T   T   + +  PD   V ML   S SGT ++   ++ +    K    PS  PLVR  D
Sbjct: 194 TGLLTRSAAGHGPPDSYAVAMLREHSNSGTFHMWRFLSRTGKWDKIDGLPSPLPLVRRLD 253

Query: 372 *D 377
            D
Sbjct: 254 ID 255


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,745,701
Number of Sequences: 37544
Number of extensions: 174129
Number of successful extensions: 247
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)