Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0149
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 112 SLSYVTAFFKF*IK*HVK*IFDLLKYFMFVTLE 14
           +LS VT FF F  K   + I   +KY  F TL+
Sbjct: 64  NLSIVTIFFNFATKKLEQFIVRFMKYHFFGTLK 96


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 452 HDHHPALIQEHLVRTVARLPLLG 384
           HDH PAL Q+  V  V    L G
Sbjct: 304 HDHRPALAQQRRVAAVQVPQLAG 326


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 491 RHQSVLVPTLPHRHDHHPALIQ 426
           R+  V+    PH+H H+ A +Q
Sbjct: 14  RNGGVVSAEHPHQHQHYGAAVQ 35


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 491 RHQSVLVPTLPHRHDHHPALIQ 426
           R+  V+    PH+H H+ A +Q
Sbjct: 14  RNGGVVSAEHPHQHQHYGAAVQ 35


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 392 LLGERTHLRRHSVSNSLHD 336
           +L   TH+ + ++ N LHD
Sbjct: 98  VLSNPTHMEKSAIYNLLHD 116


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 392 LLGERTHLRRHSVSNSLHD 336
           +L   TH+ + ++ N LHD
Sbjct: 98  VLSNPTHMEKSAIYNLLHD 116


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 506 KVKLPDDDTPAVRA 547
           K+   DDD+PA+RA
Sbjct: 115 KLDKKDDDSPALRA 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,117
Number of Sequences: 336
Number of extensions: 1987
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)