Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0149
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   7.3  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.6  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 68  LFNLKFKKRCDVRK*PMKCFCVRN 139
           L  + F  RCD+      C C RN
Sbjct: 15  LLEICFAGRCDLDNNKTNCHCARN 38


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 470 PTLPHRHDHHPAL 432
           P LPH   HHP++
Sbjct: 126 PHLPHVQQHHPSV 138


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 539 PPACRHPAALLFGRFSRHQSVLVPTLPHRHDHHPALI 429
           P A    +A++    + HQ+  V    H   HH A++
Sbjct: 849 PGASGRSSAVITPPSTHHQAAAVAAHHHHLQHHAAMV 885


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,989
Number of Sequences: 2352
Number of extensions: 8547
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)