Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0148
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   5.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.3  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.7  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 425 QEMEQPEGQKAQDGAPVQMSLPWGLTPATCMRYTAPLSMQSTS 553
           Q+ +Q + Q+ Q        L  G +PA+  RY +  +  STS
Sbjct: 797 QQQQQQQQQQQQQQQSSSDYLMVGNSPASSPRYLSAAATSSTS 839


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 420 GAVCGTNW*TIVCCSFWS 367
           G + G    T+VC +FWS
Sbjct: 380 GYLLGIQCLTVVCLAFWS 397


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 506  PGSSPTGDSSAPGHRPAPSGPQVVPFLE 423
            P   P    ++PG  P P+G ++  F+E
Sbjct: 1124 PQLKPQKPFTSPGGIPGPNGIKMPSFME 1151


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 650 AGAQXGPRRRDSXSFSGTVPS 712
           AGAQ G  +R + +  GTV S
Sbjct: 95  AGAQRGNEQRCTVTMHGTVQS 115


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 468 APSCAFWPSGCSI 430
           A +C FWP+G  I
Sbjct: 197 ANACRFWPTGRGI 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.134    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,518
Number of Sequences: 438
Number of extensions: 5463
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)