Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0144
(780 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 66 2e-11
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 32 0.45
SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4) 32 0.45
SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.79
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17) 31 1.4
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 30 1.8
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 2.4
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 29 3.2
SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6) 29 3.2
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087) 29 3.2
SB_30416| Best HMM Match : Prosystemin (HMM E-Value=2.2) 29 3.2
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 29 3.2
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 29 3.2
SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 29 4.2
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 29 4.2
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 29 5.6
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 29 5.6
SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3) 29 5.6
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 29 5.6
SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 28 7.4
SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23) 28 7.4
SB_38914| Best HMM Match : BAH (HMM E-Value=1.3e-08) 28 7.4
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 28 7.4
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 9.8
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 28 9.8
SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 28 9.8
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 9.8
SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28) 28 9.8
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 28 9.8
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = +1
Query: 247 PEVLFD--GIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTT 420
PEVL D + FD+S+LKH E QEKNPLP KD + E V+ FD +++KH
Sbjct: 674 PEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDITTESTETRA--EVKTFDHSKLKHVQ 731
Query: 421 TEEKNPL 441
TEEKNPL
Sbjct: 732 TEEKNPL 738
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Frame = +1
Query: 247 PEVLFDGIE--KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTT 420
PEVL D E KFD+S+LKH ET+EK +P KDV+ AE V+ FD +++KH
Sbjct: 522 PEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVV 579
Query: 421 TEEKNPL 441
T+EKNPL
Sbjct: 580 TQEKNPL 586
Score = 61.3 bits (142), Expect = 9e-10
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 441
++ F+ S+L+H ET+EKN LP KD +A EK GVE F K ++KH T EKNPL
Sbjct: 454 VKSFEKSKLQHVETKEKNTLPTKDTIADEK-RTAPFSGVEVFQKNKLKHVETLEKNPL 510
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 441
++ FD S+LKH ET EKNPLP V+ E + L D V FD +++KH +EKNPL
Sbjct: 643 VKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPL 702
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 259 FDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEK 432
F G+E F ++LKH ET EKNPLPD + AE + L D V FD +++KH T+EK
Sbjct: 488 FSGVEVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEK 547
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKN 435
++ FD S+LKH TQEKNPLP + E +N D V FD T++KH TT+EK+
Sbjct: 567 VKSFDHSKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKS 624
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLD--GVEHFDKTQMKHTTTEEKNPL 441
+ KFD++ LKH +T+EKN LP + + E D V+ F+K++++H T+EKN L
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTL 473
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 441
+ FD ++LKH TQEK+ +P ++ + E V+ FD +++KH T EKNPL
Sbjct: 607 VASFDHTKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPL 662
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKA 360
++ FD S+LKH +T+EKNPLPD +A EKA
Sbjct: 719 VKTFDHSKLKHVQTEEKNPLPDAKTIAQEKA 749
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +2
Query: 122 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 241
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 414 HDDGRKESTAPDRSYRSGEGKEQIPERHREL-RPTKLKHTETCEKNPLP 557
H + ++++T P + + E K P E+ + KLKH ET EKNPLP
Sbjct: 464 HVETKEKNTLPTKDTIADE-KRTAPFSGVEVFQKNKLKHVETLEKNPLP 511
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 122 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 241
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 414 HDDGRKESTAP-DRSYRSGEGKEQIPERH--RELRPTKLKHTETCEKNPLPHK 563
H ++++T P D + + ++ P+R + +KL+H ET EKN LP K
Sbjct: 424 HVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTK 476
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 474 KEQIPERHRELRP---TKLKHTETCEKNPLP 557
KE+ + E++ +KLKH ET EKNPLP
Sbjct: 633 KEEAVDSRAEVKSFDHSKLKHVETVEKNPLP 663
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Frame = +1
Query: 328 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLN--GIE 501
P +V + + + V FD +KH T+EKN L ++F + ++
Sbjct: 396 PGSEVAYVDGGSKPDVSEVAKFDAANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVK 455
Query: 502 NFVPLXXXXXXXXXXXXFPTKDVIEQEK 585
+F PTKD I EK
Sbjct: 456 SFEKSKLQHVETKEKNTLPTKDTIADEK 483
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 354 ESPPEPL-GRSRTLRQDSDEA-HDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKH 527
E PE L RS + D+ + H + +++ P + E + E + +KLKH
Sbjct: 519 EMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMPTKDVIEAEAIDSRAEV-KSFDHSKLKH 577
Query: 528 TETCEKNPLP 557
T EKNPLP
Sbjct: 578 VVTQEKNPLP 587
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 513 TKLKHTETCEKNPLPHK 563
+KLKH E EKNPLP K
Sbjct: 689 SKLKHVEVQEKNPLPTK 705
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 513 TKLKHTETCEKNPLP 557
+KLKH +T EKNPLP
Sbjct: 725 SKLKHVQTEEKNPLP 739
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 110 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQ 250
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K +
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVE 380
>SB_36280| Best HMM Match : Dehydrin (HMM E-Value=4.4)
Length = 426
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +3
Query: 288 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 467
P+ RDS E S + + SPP SR S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSARVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 468 EGKEQIPERHRE 503
+E+ P R R+
Sbjct: 110 SSRERRPPRDRD 121
>SB_34529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +3
Query: 288 PAEAHRDSGEEPA-SGQRRCRSG-ESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 461
P H GE SG+RR R +S E R R D+D + ++ES +
Sbjct: 138 PRARHDTDGESKRESGRRRARHDTDSESEKESGRRRARHDTD---GESKRESRRRRARHD 194
Query: 462 SGEGKEQIPERHRELRPTKLKHTETCEKN 548
+ E+ P R R T + +T +KN
Sbjct: 195 TDSESEKEPRRRRARHDTDMSRIKTNQKN 223
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 40 ESSIPFVIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 174
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +3
Query: 288 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 467
P+ RDS E S + + SPP SR S + DD R R R
Sbjct: 51 PSSLGRDSSERRPSVRVSSDNSRSPPHRRDSSRRSHSPSRRSSDD-RSTDARDRRDRRRS 109
Query: 468 EGKEQIPERHRE 503
+E+ P R R+
Sbjct: 110 SSRERRPPRDRD 121
>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
Length = 1178
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +2
Query: 92 SVSDTPSLKDLPKVAT--DLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKFYST 265
S+ ++P+ DLP++A+ +++S + G + T P ATE T + +T
Sbjct: 864 SIVNSPNTNDLPQLASSGNIESPINGNQQQIVDSSRTTRGETEPRPAQTATENTTRGNAT 923
Query: 266 VSRSLI 283
RSLI
Sbjct: 924 RGRSLI 929
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 304 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
+T E++P DK A +LLDG+ FD+ + +H
Sbjct: 261 KTIEQDPTSDKSYKALRDTTHDLLDGLRDFDQAKEEH 297
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 304 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
+T E++P +K A +LLDG++HF + + +H
Sbjct: 163 KTIEQDPSSEKSYQALRDTTHDLLDGLQHFGQAKEEH 199
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 92 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 238
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 432 ESTAPDRSYRSGEGKEQIPERHR 500
+STA D SY SG G E P HR
Sbjct: 483 DSTASDSSYDSGSGPELSPNEHR 505
>SB_17850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +3
Query: 285 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKES 437
E E + E+PA+GQR+ R + + L R ++ + DS++ D+ + ES
Sbjct: 19 EEEEKDEEKEEKPATGQRK-RKTSTQKQALTRKKSKQSDSED-EDEKKSES 67
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Frame = +1
Query: 256 LFDGIEKFDSSQLKHTE-----------TQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKT 402
L DG+ FD ++ +H + E++P +K A +LLDG+ +FD+
Sbjct: 192 LLDGLRYFDQAKEEHAKLIPKYHEIMIKNIEQDPKSEKSYQALRDTTHDLLDGLRYFDQA 251
Query: 403 QMKH 414
+ +H
Sbjct: 252 KEEH 255
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 313 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 75 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 108
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 313 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 173 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 206
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 313 EKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
E++P +K A +LLDG+ +FD+ + +H
Sbjct: 320 EQDPKSEKSYQALRDTTHDLLDGLRYFDQAKEEH 353
>SB_13912| Best HMM Match : rRNA_methylase (HMM E-Value=2.6)
Length = 692
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 304 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
+T E++P +K A +LLDG+ +FD+ + +H
Sbjct: 537 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQAKEEH 573
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 304 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 567 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 603
>SB_35592| Best HMM Match : zf-CCHC (HMM E-Value=0.0087)
Length = 556
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 304 ETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
+T E++P +K A +LLDG+ +FD+ +H
Sbjct: 492 KTIEQDPSSEKSYQALRDTTHDLLDGLRYFDQASKEH 528
>SB_30416| Best HMM Match : Prosystemin (HMM E-Value=2.2)
Length = 455
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 360 PPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKH 527
PP+ +GR T + + H D ++ P RS G KE + ++H + KH
Sbjct: 305 PPKVMGRDTTAKSPT-YPHRDAHRD-ILPSRSTYGGSYKEPVRQKHVHKMESNAKH 358
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 357 SPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTET 536
+PP+P+ R + S A ++ RS S E E+ H+ PT++ T
Sbjct: 157 TPPQPVRRQLSSPGQSVNAIQTPPRKPVNLTRSGSSEELLEKSTTSHKTSSPTRMFKRAT 216
Query: 537 CEKNPLPHK 563
E+NP K
Sbjct: 217 SERNPQQRK 225
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 363 PEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTE 533
PEP G+ T R + D +ES AP++ + + K++ + ++ PT+ T+
Sbjct: 362 PEPEGKKGTKR-GKKKTSKDATEESEAPNKKRKEKKKKKKKKKASSKIEPTETAETD 417
>SB_52306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +3
Query: 288 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSG 467
P + HR S + +G+R G+ PE R ++ + E + T G
Sbjct: 75 PEKQHRGSVHKRGNGER----GQGSPEKQQRGSVHKRGNGEGKSSPENQHTGSIYKRGKG 130
Query: 468 EGKEQIPERHR 500
EGK +HR
Sbjct: 131 EGKSSPENQHR 141
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 482
RD G P+ R + +P G R R + D DD R E P S G + +
Sbjct: 623 RDDGGRPSREPPRDQHRRPYDDPEGLERESRGERDVRRDDPR-EDRRPGMSEGRGRDRPE 681
Query: 483 IPERHRE 503
P+R E
Sbjct: 682 RPDRTGE 688
>SB_14885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -3
Query: 367 SGGLSPLRQRLCPEAGSSPESRCASAGSNQTSRYRRIKLLGLLSG 233
+GG S L + AG+ PE C A + S Y +G +SG
Sbjct: 102 AGGCSVLEVNVSNTAGAEPEHCCCDADYYEDSEYGGFDPVGFVSG 146
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 29.1 bits (62), Expect = 4.2
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Frame = +3
Query: 285 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRT-LRQDSDEAHDDGR-------KEST 440
E ++RD + P S + R + + GRS+ LR D+ D GR K+
Sbjct: 90 ENRPSNRDKVDLPRSKRERTQDKSDGRDGRGRSKERLRDRRDDRSDKGRWSERRSSKDRE 149
Query: 441 APDRSYRSG------EGKEQIPERHRELRPTKLKHTETCEKNPLPHKGRH 572
+ R +RS + K + P R R R ++ + T ++P P H
Sbjct: 150 SRKREHRSRSKSRDKKPKPESPSRGRSSRRSRSQERGTSNRSPSPRGRSH 199
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 399 DSDEAHDDGRKESTAPDRSYRSGEGKEQIPERH-RELRPTKLKHTETCEKNPLPHKGR 569
D H GR++ + K + P RH R R KH+ + + P H+ R
Sbjct: 42 DRKRGHSRGRRDDRRGGKRRSFSRSKSRTPPRHRRRSRSPNKKHSRSKSRTPPRHRRR 99
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 113 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKFYSTVSRS 277
L DL +V +LKS+ EG CL D++ + DV E + S VS S
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKEH-ENLKSAVSIS 1177
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 EPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRK-ESTAPDRS 455
EP R+C SPP GRS+T+ + D R ST+ D+S
Sbjct: 335 EPPQASRQC----SPPSRTGRSKTIHKRPRMTQPDSRNVSSTSRDKS 377
>SB_53576| Best HMM Match : SCAN (HMM E-Value=2.3)
Length = 334
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +3
Query: 312 GEEPASGQRR----CRSGESPPEPLGRSRT-LRQDSDEAHDDGRK---ESTAPDRSYRSG 467
GEEP+S S + P P+ + + +D D+ +G + ES A DRS+ SG
Sbjct: 181 GEEPSSRTETPDLYILSNDIPTSPVDEAPLPVDEDDDDEQVNGLRMLPESVALDRSHESG 240
Query: 468 EGKEQIP 488
G +P
Sbjct: 241 RGTPHLP 247
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/67 (16%), Positives = 33/67 (49%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 482
++ G+ + +++ R E P + L + ++ D+ + +E PD+ + +++
Sbjct: 829 QEQGKPDKNKEKQDREQEKPDKDLEKQYQKQEKPDKGQEKQDREQEKPDKDQEKQDREQE 888
Query: 483 IPERHRE 503
P++ +E
Sbjct: 889 KPDKDQE 895
>SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1)
Length = 432
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +3
Query: 345 RSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLK 524
R+GE E QD + D R E RSG+ ++ E+ RE + +
Sbjct: 119 RNGEGDREKRKERSDRNQDYERKDRDRRHEKNGESSRIRSGDREKSDREKEREKERRRRR 178
Query: 525 HTE 533
H +
Sbjct: 179 HED 181
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +3
Query: 300 HRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 479
H D G +RR + P +P R + ++ S E G +E T + + ++
Sbjct: 179 HEDEGSGDRRRERRDKDAHDPEDPKRREKDDKKKSRE-RSKGDEEHTKDSKL----DEED 233
Query: 480 QIPERHRELRPTKLKHTETCEK 545
+I R +EL T + E E+
Sbjct: 234 RIRRREKELLETLKQEEEAVEE 255
>SB_34166| Best HMM Match : RVT_1 (HMM E-Value=1e-23)
Length = 385
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 262 DGIEKFDSSQLKHTETQEKNPLP 330
D +E+F S +H T +KNPLP
Sbjct: 206 DRLEQFSSQTGRHINTTKKNPLP 228
>SB_38914| Best HMM Match : BAH (HMM E-Value=1.3e-08)
Length = 733
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 360 PPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETC 539
PP P S+ + S ++ DD ST + S E E +P R ++ R + T
Sbjct: 383 PPSPSPSSKKKDEPSFKSKDDSAYRSTTEEAS--GNESAENVPTRRQKGRAKRRGRLSTR 440
Query: 540 EKN 548
E++
Sbjct: 441 ERH 443
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 28.3 bits (60), Expect = 7.4
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Frame = +3
Query: 255 FIRRYREV*FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLR-----QDSDEAHD 419
F++R +E+ AE RDS +EPA R S ES G S + QDS H
Sbjct: 666 FVKREQEMERVRAEYSRDS-KEPARESRNL-SNESRKSTQGESSNVHEARNVQDSRNPHS 723
Query: 420 DGR----------KESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEKNP 551
+ R ES P RS + +IP + + ++ T NP
Sbjct: 724 ESRVSDAESRNPHAESRNPRSESRSPRSESRIPYADSRITHNETRNAHTESHNP 777
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 269 IPSNKTSGSSQWQRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLW 135
IP+N SSQW R E H R G + S R ++ W
Sbjct: 707 IPNNAIRASSQWDRNHGPERARLHIHRGRGKTGAWSARRNNRYQW 751
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 269 IPSNKTSGSSQWQRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLW 135
IP+N SSQW R E H R G + S R ++ W
Sbjct: 3513 IPNNAIRASSQWDRNHGPERARLHIRRGRGKTGAWSARRNNRYQW 3557
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 399 DSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEKN 548
DSD + DDG ++ +RS + + K++ ++ ++ R +++ EKN
Sbjct: 756 DSDCSSDDGENSDSSRERSIKKHKKKKKRKKKIKKNRKKTMENESKNEKN 805
>SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 309 SGEEPASGQRRCRSGE---SPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKE 479
S + +S +RR R E PP + ++ DGR +S AP R+ +G KE
Sbjct: 8 SSKSSSSRRRRPREQEIFIGPPTGMTSDSSVASSRGRRDGDGRSKSKAPPRAPETGLPKE 67
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 432 ESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEKNP 551
E+ S R EGK + +R+R P + TET E NP
Sbjct: 262 ENITVSNSVRMSEGKS-VFKRNRPTEPASVPSTETKEANP 300
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -2
Query: 269 IPSNKTSGSSQWQRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLW 135
IP+N SSQW R E H R G + S R ++ W
Sbjct: 83 IPNNAIRASSQWDRNHGPERARLHIRRGRGKTGAWSARRNNRYQW 127
>SB_11563| Best HMM Match : SNF7 (HMM E-Value=0.28)
Length = 859
Score = 27.9 bits (59), Expect = 9.8
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 306 DSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAP-DRSYRSGEGKEQ 482
D+G +S R S ES E + + T +D D D R+ +++P D S R G+G +
Sbjct: 8 DNGVALSSMSSRQTSTESLEENIRKILTSCEDDDNEFLDRRRSTSSPEDVSNRKGKGSPK 67
Query: 483 IPERHRE 503
E ++
Sbjct: 68 EVENGKK 74
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +3
Query: 378 RSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTK 518
R R + + D+ R R YR G + + PER R+ R +
Sbjct: 238 RDREVERARDQKDVRARDRDPERSRDYRDGRPRNRSPERQRDQRDAR 284
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,016,277
Number of Sequences: 59808
Number of extensions: 471484
Number of successful extensions: 1819
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1807
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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