Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0144
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 50 1e-06
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 33 0.30
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 33 0.30
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 29 2.8
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 2.8
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 3.7
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 29 3.7
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 4.9
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 29 4.9
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 29 4.9
Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 6.5
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 6.5
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 6.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 28 6.5
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 28 6.5
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 28 6.5
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 28 6.5
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 28 6.5
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 28 6.5
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 8.6
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1
Query: 289 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEK 432
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEK 70
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1
Query: 268 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 441
IE FDS++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 54 IEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL 111
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/56 (44%), Positives = 27/56 (48%)
Frame = +1
Query: 256 LFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 423
L D I F S LK TET EKN LP VA EK L FDK+ + H T
Sbjct: 88 LTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT----LQMAASFDKSALHHVET 139
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 107 PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKFYSTVSRSL 280
PS D+ K +L ++ F + L+ +T EK VLPS DVA EKT + ++ +S
Sbjct: 74 PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQMAASFDKSA 133
Query: 281 I 283
+
Sbjct: 134 L 134
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 110 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEK 244
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEK 45
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 152 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEK 244
++E F+++ L EKIVLPSA+D+ EK
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEK 83
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 32.7 bits (71), Expect = 0.30
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 482
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 483 IPERHRELRPTKLKHTETCEKNPLPHK 563
P R RE R ++ K +E E PLP K
Sbjct: 124 SPRRRRE-RSSERKQSE--EPAPLPEK 147
Score = 27.9 bits (59), Expect = 8.6
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Frame = +3
Query: 291 AEAHRDSGEEPASGQRRCR--SGESPPEPLGRSRT------LRQDSDEAHDDGRK---ES 437
AE HRD E RR R S E+ G R RQDSD+ GR+ +S
Sbjct: 766 AERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDS 825
Query: 438 TAPDRSYRSGEGKEQIPERHRELRPTKLKHTE 533
R R + + E HRE R + K E
Sbjct: 826 GERRRGDRDRRDRNKDQEDHREDRRDRSKDRE 857
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 32.7 bits (71), Expect = 0.30
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 482
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 483 IPERHRELRPTKLKHTETCEKNPLPHK 563
P R RE R ++ K +E E PLP K
Sbjct: 124 SPRRRRE-RSSERKQSE--EPAPLPEK 147
Score = 27.9 bits (59), Expect = 8.6
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 11/92 (11%)
Frame = +3
Query: 291 AEAHRDSGEEPASGQRRCR--SGESPPEPLGRSRT------LRQDSDEAHDDGRK---ES 437
AE HRD E RR R S E+ G R RQDSD+ GR+ +S
Sbjct: 766 AERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDS 825
Query: 438 TAPDRSYRSGEGKEQIPERHRELRPTKLKHTE 533
R R + + E HRE R + K E
Sbjct: 826 GERRRGDRDRRDRNKDQEDHREDRRDRSKDRE 857
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/89 (28%), Positives = 36/89 (40%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 482
++S +EP + ++ PP R + SDE KES D GEGK++
Sbjct: 1244 KESKKEPTTEDGEVKTPSPPPAKKTRIVDRLKRSDEPSKKDEKES-PKDTESEKGEGKKR 1302
Query: 483 IPERHRELRPTKLKHTETCEKNPLPHKGR 569
ER ++ K K E K K R
Sbjct: 1303 -RERSKDKETGKEKRLEKDNKEREKDKER 1330
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 294 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 434
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 408 EAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLK 524
E HD+G + T E + +P +HRE+ TKLK
Sbjct: 41 EKHDEGCERMTRNGSVCAVEESEPDVPTQHREVLLTKLK 79
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/78 (24%), Positives = 29/78 (37%)
Frame = +3
Query: 336 RRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPT 515
RR S S GRSR+ ++ + R S + RS + RHR
Sbjct: 111 RRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSKA 170
Query: 516 KLKHTETCEKNPLPHKGR 569
+ + T +K P + R
Sbjct: 171 RGRRASTAKKTPAKRRSR 188
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = +3
Query: 303 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 476
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 477 EQIPERHRELRPTKLKHTE 533
+ PER R + E
Sbjct: 292 NERPERPSRWRSRSRERKE 310
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 393 RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEK 545
+ D+ + DD +KE D+ + E KE+ E +E + + K E E+
Sbjct: 154 KSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEE 204
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 444 PDRSYRSGEGK--EQIPERHRELRPTKLKHTETCEKNPLPHKGRH 572
P++ RSGEG EQ HR+ RPT H + + + K H
Sbjct: 118 PEKPERSGEGSSTEQRDRDHRQHRPTSHHHRDHKDHHRRDDKHHH 162
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +3
Query: 282 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 461
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 462 SGEGKEQIPERHR 500
+EQ ER R
Sbjct: 382 EQNRREQQRERER 394
>Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical
protein F28D1.6 protein.
Length = 230
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 399 DSDEAHDDGR--KESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTE 533
DS ++ DD + + + D + +GK++ E+ +E + TKL +E
Sbjct: 69 DSSDSSDDDKHGNDEHSGDEEEKEHDGKDKATEKEKEKKETKLTKSE 115
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 244 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 152
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 285 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 464
EP S EP G R CR + R R R+ S+E H K + R S
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRK--RLRRARETSEETHTRLAKAADY-KRKRCS 106
Query: 465 GEGKEQIPER-HRELRPTKLKHTETCE 542
E +E+ ER R+ K++ + E
Sbjct: 107 EETEEEYRERLKRQAERKKMERMQESE 133
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +3
Query: 315 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGR-----------KESTAPDRSYR 461
E+ AS Q+ E P +P ++ +D DE D +ES++ D R
Sbjct: 393 EDEASAQK-----EKPKKPATKASDADEDDDEESSDEESDEESEDSEESEESSSDDDEDR 447
Query: 462 SGEGKEQIPERHRELRPTKLKHTETCEKN 548
G+ KE + ER ++ K E + N
Sbjct: 448 GGQQKETVEERMERIKLRIAKRKEVAQAN 476
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 288 PAEAHRDSGEEPASGQRRCRSGESPPE--PLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 461
P+ A D +P+ QR+ R+ + P E P GR + + G + A +
Sbjct: 680 PSVAPYDFPADPSKKQRKQRAKKQPGEEPPAGRGK----GGKKGRGAGAVGAAAAG-GRK 734
Query: 462 SGEGKEQIPERHRELRPTKLKHTETCEKNPLPHK 563
S G + P +RP L+ + + + NP PH+
Sbjct: 735 SAGGAGENPFGMDPMRPPMLQRSSSEQHNPNPHQ 768
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 28.3 bits (60), Expect = 6.5
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +3
Query: 315 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 494
+ P +RR + E + RSR R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 495 HRELRPTKLKHTETCEKN-PLPHKGRH-*AREI 587
E + + + E + P P K R ARE+
Sbjct: 66 KEEKQEQEEEDGEIRDTTPPAPEKPRQLTAREL 98
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 414 HDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEKNPLPHKGRH*AREISL 593
+D GR+ + A RS E I R +ELR +L+ ++ + H+ E SL
Sbjct: 476 NDYGRRRNHANSRSGEDEEKLNAIVRREKELR-NRLQKSQKASSSSYRHRSNSSDAEESL 534
Query: 594 NHYFI 608
N + I
Sbjct: 535 NEWDI 539
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 321 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRS-YRSGEGKEQIPERH 497
P SG R ++ P+PL +S+ + + A+ GR+E+ R+ E E +
Sbjct: 163 PGSGMASPRL-QTTPQPLTKSQKAKDEMKMAYQVGREEALQQRRNDLEDDEENLGYAETY 221
Query: 498 RELRPTKLK 524
E P KL+
Sbjct: 222 SEYTPAKLR 230
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +3
Query: 315 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGR-----------KESTAPDRSYR 461
E+ AS Q+ E P +P ++ +D DE D +ES++ D R
Sbjct: 393 EDEASAQK-----EKPKKPATKASDADEDDDEESSDEESDEESEDSEESEESSSDDDEDR 447
Query: 462 SGEGKEQIPERHRELRPTKLKHTETCEKN 548
G+ KE + ER ++ K E + N
Sbjct: 448 GGQQKETVEERMERIKLRIAKRKEVAQAN 476
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +3
Query: 288 PAEAHRDSGEEPASGQRRCRSGESPPE--PLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 461
P+ A D +P+ QR+ R+ + P E P GR + + G + A +
Sbjct: 680 PSVAPYDFPADPSKKQRKQRAKKQPGEEPPAGRGK----GGKKGRGAGAVGAAAAG-GRK 734
Query: 462 SGEGKEQIPERHRELRPTKLKHTETCEKNPLPHK 563
S G + P +RP L+ + + + NP PH+
Sbjct: 735 SAGGAGENPFGMDPMRPPMLQRSSSEQHNPNPHQ 768
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 405 DEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEK 545
DE H++ K+S+ +Y + +IP +ELR + ++ + CEK
Sbjct: 231 DELHENVEKQSSKCPMTYEESQSMLEIPV--KELRMSPDRYQKYCEK 275
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 241 EDPEVLFDGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 414
++ E L +E S H + ++KN D ++ E Q L+G F+ +MK+
Sbjct: 375 KEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFNSPEMKN 432
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 381 SRTLRQDSDEAHDDGRKE----STAPDRSYRSGEGKEQIPERHRELRPTKLKHTETCEKN 548
S LR++ + DDG +E S + S + G+E++ E T+ EKN
Sbjct: 862 SSILRKEKKQKKDDGEEEDEEASEEDEASAAAENGEEKMETEQNETAAAAAAETQEAEKN 921
Query: 549 PLPHKGR 569
GR
Sbjct: 922 ARRFTGR 928
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,941,952
Number of Sequences: 27780
Number of extensions: 349938
Number of successful extensions: 1355
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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