Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0142
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7IG25 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_UPI0000F1FA1F Cluster: PREDICTED: hypothetical protein;...    33   5.9  
UniRef50_Q2GWG6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  

>UniRef50_A7IG25 Cluster: Putative uncharacterized protein; n=1;
           Xanthobacter autotrophicus Py2|Rep: Putative
           uncharacterized protein - Xanthobacter sp. (strain Py2)
          Length = 181

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +3

Query: 663 PKIGXP*NVVRLPEVQTPDVDITNLGSPRLLRH 761
           P++  P   VRLP+VQ P VD+T +G P + RH
Sbjct: 99  PRVNVP--RVRLPDVQLPAVDMTRMGLPDVRRH 129


>UniRef50_UPI0000F1FA1F Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 117

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 358 PDNSQSSDTSGSAADPVRDTCWCMYEAYSRSTHPG 254
           P  S  S+ SG+ A P R  CW       RST PG
Sbjct: 27  PHLSSPSEPSGTTAPPFRSPCWSSNAGQHRSTPPG 61


>UniRef50_Q2GWG6 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 470

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 353 VRKKVCVKMTSVHPCRHFLDSITCSHKVCTKIWRSIYLLKF 475
           V  + CV  T +HP      S +C H+ C    RS++   F
Sbjct: 190 VVSRTCVACTEIHPVTRLAKSPSCGHEYCQDCLRSLFTSSF 230


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,774,939
Number of Sequences: 1657284
Number of extensions: 18424757
Number of successful extensions: 41534
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41521
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)